RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ZNF850A8MQ14 1090 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 TSPAN4O14817 238 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 PTBP3O95758 552 aaKnown RBP16.51■□□□□ 0.23
LSM4-203ENST00000593829 CDK2P24941 298 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 PRDX4Q13162 271 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 TMEM249Q2WGJ8 235 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 PRAMEF6Q5VXH4 476 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 CLEC9AQ6UXN8 241 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 GCDHQ92947 438 aaPredicted RBP16.51■□□□□ 0.23
LSM4-203ENST00000593829 CXorf58Q96LI9 332 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 GSX1Q9H4S2 264 aaPredicted RBP16.51■□□□□ 0.23
LSM4-203ENST00000593829 DCAF16Q9NXF7 216 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 TANC2Q9HCD6 1990 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 LRRC30A6NM36 301 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 UBCP0CG48 685 aaKnown RBP16.5■□□□□ 0.23
LSM4-203ENST00000593829 CCL1P22362 96 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 KIR3DL2P43630 455 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 MICU1Q9BPX6 476 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 FN3KRPQ9HA64 309 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 UFSP2Q9NUQ7 469 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 FRRS1LQ9P0K9 344 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 MTFP1Q9UDX5 166 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 V9GYS6 101 aa16.5■□□□□ 0.23
LSM4-203ENST00000593829 DYSFO75923 2080 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 DHRS7CA6NNS2 312 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 SYT7O43581 403 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 ZFPL1O95159 310 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 LY6G6DO95868 133 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 FAHP16930 419 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 NANOS3P60323 173 aaKnown RBP16.49■□□□□ 0.23
LSM4-203ENST00000593829 BTN1A1Q13410 526 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 Q499Y3 187 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 Q6ZSR3 168 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 LRRTM1Q86UE6 522 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 ZDHHC23Q8IYP9 409 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 CCDC54Q8NEL0 328 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 OR11L1Q8NGX0 322 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 OR14K1Q8NGZ2 314 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 Q8TCH9 128 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 HIST1H2AAQ96QV6 131 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 TMEM178BH3BS89 294 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 XRCC3O43542 346 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 LPLP06858 475 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 GRPP07492 148 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 MELTFP08582 738 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 CSF1P09603 554 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 VSIG10L2P0DP72 767 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 RBMXP38159 391 aaKnown RBP16.49■□□□□ 0.23
LSM4-203ENST00000593829 PMELP40967 661 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 GMFBP60983 142 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 SSBP1Q04837 148 aaKnown RBP16.49■□□□□ 0.23
LSM4-203ENST00000593829 GSG1LQ6UXU4 331 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 C1orf87Q8N0U7 546 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 CLDND2Q8NHS1 167 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 OR5P3Q8WZ94 311 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 ORAI1Q96D31 301 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 RTL8AQ9BWD3 113 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 TCF7L1Q9HCS4 588 aa16.49■□□□□ 0.23
LSM4-203ENST00000593829 ZANQ9Y493 2812 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 WNT9BO14905 357 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 RBBP9O75884 186 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 IRF2P14316 349 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 RPA2P15927 270 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 ALKBH1Q13686 389 aaKnown RBP16.48■□□□□ 0.23
LSM4-203ENST00000593829 TMEM244Q5VVB8 128 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 SERPINA12Q8IW75 414 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 CDH26Q8IXH8 852 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 PDZD9Q8IXQ8 264 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 OR2AK2Q8NG84 335 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 ALX4Q9H161 411 aaPredicted RBP16.48■□□□□ 0.23
LSM4-203ENST00000593829 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
LSM4-203ENST00000593829 A0A1B0GW55 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 CYB5R3P00387 301 aaPredicted RBP16.47■□□□□ 0.23
LSM4-203ENST00000593829 ISG15P05161 165 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 HEXAP06865 529 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L2P0CJ85 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L3P0CJ86 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L4P0CJ87 422 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L5P0CJ88 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L6P0CJ89 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4L7P0CJ90 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 KRTAP1-1Q07627 177 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 OR1S1Q8NH92 325 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DNTTIP1Q9H147 329 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 DUX4Q9UBX2 424 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 TEP1Q99973 2627 aaKnown RBP16.47■□□□□ 0.23
LSM4-203ENST00000593829 TRBV5-7A0A0A0MS05 114 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 LOC107986453A0A1B0GWG9 222 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 A6NLC8 198 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 H3BSH0 61 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 IGHV2-70P01814 119 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 IGHV4-31P0DP07 118 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 ADRA2CP18825 462 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 IL2RGP31785 369 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 OR1M1Q8NGA1 313 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 COQ8AQ8NI60 647 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 THRSPQ92748 146 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 SLC25A32Q9H2D1 315 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 C1orf123Q9NWV4 160 aa16.47■□□□□ 0.23
LSM4-203ENST00000593829 OR4C45A6NMZ5 311 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms