RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 CCDC54Q8NEL0 328 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 OR13C9Q8NGT0 318 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 LEAP2Q969E1 77 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 OPALINQ96PE5 141 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 RIBC2Q9H4K1 309 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 EXOSC4Q9NPD3 245 aaKnown RBP8.45□□□□□ -1.06
USE1-203ENST00000593597 ING3Q9NXR8 418 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 TAS2R3Q9NYW6 316 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 AASSQ9UDR5 926 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 TRGV10A0A0A0MS01 117 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 A0A1W2PPI3 338 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 OR4C45A6NMZ5 311 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 IGHV3-7P01780 117 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 PF4P02776 101 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 MT-ND2P03891 347 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 ISG15P05161 165 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 CSN2P05814 226 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 CDC42P60953 191 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 IL18R1Q13478 541 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 ZBTB49Q6ZSB9 765 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 LHFPL2Q6ZUX7 228 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 RTN4RL2Q86UN3 420 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
USE1-203ENST00000593597 OR8J1Q8NGP2 316 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 OR13A1Q8NGR1 328 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 ZNF596Q8TC21 504 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 RBMXL1Q96E39 390 aaKnown RBP8.44□□□□□ -1.06
USE1-203ENST00000593597 PELI1Q96FA3 418 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 RCC1LQ96I51 464 aaKnown RBP8.44□□□□□ -1.06
USE1-203ENST00000593597 NOL4LQ96MY1 436 aaPredicted RBP8.44□□□□□ -1.06
USE1-203ENST00000593597 ZNF649Q9BS31 505 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 GAL3ST2Q9H3Q3 398 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 OAZ3Q9UMX2 235 aa8.44□□□□□ -1.06
USE1-203ENST00000593597 SAC3D1A6NKF1 404 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 LEUTXA8MZ59 168 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 SERPINA3P01011 423 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 SNRNP70P08621 437 aaKnown RBP8.43□□□□□ -1.06
USE1-203ENST00000593597 VSIG8P0DPA2 414 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 ZNF44P15621 663 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 PRKACBP22694 351 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 FASP25445 335 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 PTGFRP43088 359 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 OR3A4PP47883 348 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 KHDC1LQ5JSQ8 128 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 KRBOX4Q5JUW0 171 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 TMEM244Q5VVB8 128 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 FAM53AQ6NSI3 398 aaPredicted RBP8.43□□□□□ -1.06
USE1-203ENST00000593597 ZNF329Q86UD4 541 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 OSR2Q8N2R0 312 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 C5orf56Q8N8D9 126 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 SPSB1Q96BD6 273 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 ADI1Q9BV57 179 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 OSBPL10Q9BXB5 764 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 MYRFQ9Y2G1 1151 aa8.43□□□□□ -1.06
USE1-203ENST00000593597 TRAV24A0A0B4J272 114 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 LINC01548A6NM66 108 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
USE1-203ENST00000593597 E9PI62 339 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 HSPB6O14558 160 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 SH2D1BO14796 132 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 SLC16A6O15403 523 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 CCDC159P0C7I6 412 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 ZNF20P17024 532 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 BRS3P32247 399 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 THBS3P49746 956 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 RPL23AP62750 156 aaKnown RBP8.42□□□□□ -1.06
USE1-203ENST00000593597 SCN1BQ07699 218 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 BNIP1Q12981 228 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 TMED1Q13445 227 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 RBM39Q14498 530 aaKnown RBP8.42□□□□□ -1.06
USE1-203ENST00000593597 C9orf152Q5JTZ5 239 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 OR52W1Q6IF63 320 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 OR2W3Q7Z3T1 314 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 FAM220AQ7Z4H9 259 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 OR4X2Q8NGF9 303 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 OR51T1Q8NGJ9 327 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 OR56B4Q8NH76 319 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 CAPSLQ8WWF8 208 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 RNFT2Q96EX2 444 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 CYYR1Q96J86 154 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 AKR1E2Q96JD6 320 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 DUX3Q96PT4 197 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 P2RX4Q99571 388 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 LINC00574Q9H8X3 128 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 ISG20L2Q9H9L3 353 aaKnown RBP8.42□□□□□ -1.06
USE1-203ENST00000593597 CALYQ9NYX4 217 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 LINC00527Q9UJ94 153 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 MOB4Q9Y3A3 225 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 AP4S1Q9Y587 144 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 HSPE1-MOB4S4R3N1 261 aa8.42□□□□□ -1.06
USE1-203ENST00000593597 TRAV39A0A0B4J263 110 aa8.41□□□□□ -1.06
USE1-203ENST00000593597 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
USE1-203ENST00000593597 PSMB11A5LHX3 300 aa8.41□□□□□ -1.06
USE1-203ENST00000593597 J3QR06 171 aa8.41□□□□□ -1.06
USE1-203ENST00000593597 CYB5AP00167 134 aa8.41□□□□□ -1.06
USE1-203ENST00000593597 HTR1AP08908 422 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms