RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	NPBWR2	P48146	333 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	VEGFC	P49767	419 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	ZNF79	Q15937	498 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	AVPI1	Q5T686	147 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	BATF2	Q8N1L9	274 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	CELF2-AS1	Q8N7Q2	184 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	C15orf40	Q8WUR7	153 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	ITLN1	Q8WWA0	313 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	MRPS24	Q96EL2	167 aa	Known RBP	12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	SOST	Q9BQB4	213 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	TLNRD1	Q9H1K6	362 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	IL19	Q9UHD0	177 aa		12.53	□□□□□ -0.4
PKN1-215	ENST00000592960	TRAV18	A0A075B6X5	111 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	hCG_1807616	A0A1W2PRN6	198 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	TPD52L2	O43399	206 aa	Known RBP	12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	PTBP3	O95758	552 aa	Known RBP	12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	TAS2R20	P59543	309 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	ELP2	Q6IA86	826 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	RBMS3	Q6XE24	437 aa	Known RBP	12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	C11orf53	Q8IXP5	236 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960		Q8IYB0	196 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	GDPD1	Q8N9F7	314 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	CHST4	Q8NCG5	386 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	OR56B1	Q8NGI3	324 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	RAB1C	Q92928	201 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960		Q96M66	194 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	ZNF488	Q96MN9	340 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	NICN1	Q9BSH3	213 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	CCDC32	Q9BV29	185 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	TM2D1	Q9BX74	207 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	SRR	Q9GZT4	340 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	ZMAT3	Q9HA38	289 aa	Known RBP	12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	FN3KRP	Q9HA64	309 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	RHOF	Q9HBH0	211 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	C1orf123	Q9NWV4	160 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960	PPIAL4A	Q9Y536	164 aa		12.52	□□□□□ -0.41
PKN1-215	ENST00000592960		A0A0A6YYD4	124 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	RAB27B	O00194	218 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	TPPP	O94811	219 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	CD55	P08174	381 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	PGA5	P0DJD9	388 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	PRKACA	P17612	351 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	TNFRSF1A	P19438	455 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	GABRR1	P24046	479 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	MNDA	P41218	407 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	FGF12	P61328	243 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	DCTN2	Q13561	401 aa	Known RBP	12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	MPPED2	Q15777	294 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	HFE	Q30201	348 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	MOGAT2	Q3SYC2	334 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	FAM209A	Q5JX71	171 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	C16orf87	Q6PH81	154 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	WDR82	Q6UXN9	313 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	ZNF826P	Q6ZT77	177 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	SNX29P2	Q8IUI4	249 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	SIGLECL1	Q8N7X8	197 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960		Q8NFD4	153 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	OR10R2	Q8NGX6	335 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	C22orf15	Q8WYQ4	148 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	EMG1	Q92979	244 aa	Known RBP	12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	TIMD4	Q96H15	378 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	EGLN1	Q9GZT9	426 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	UNKL	Q9H9P5	680 aa	Known RBP	12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	DECR2	Q9NUI1	292 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	RBFOX1	Q9NWB1	397 aa	Known RBP	12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	ST3GAL6	Q9Y274	331 aa		12.51	□□□□□ -0.41
PKN1-215	ENST00000592960	AKR7A2	O43488	359 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	NXPH2	O95156	264 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	ACAA1	P09110	424 aa	Predicted RBP	12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	GATA4	P43694	442 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	SNU13	P55769	128 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	RBM11	P57052	281 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	PIGY	Q3MUY2	71 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	SPRN	Q5BIV9	151 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	FIP1L1	Q6UN15	594 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	MOGAT3	Q86VF5	341 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	OR8H2	Q8N162	312 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	FAM58A	Q8N1B3	248 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960		Q8N402	240 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	FAM89B	Q8N5H3	189 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	POC1A	Q8NBT0	407 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	OR10Z1	Q8NGY1	313 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	LRRC29	Q8WV35	223 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	ERGIC1	Q969X5	290 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	ABHD1	Q96SE0	405 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	NUP50	Q9UKX7	468 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.5	□□□□□ -0.41
PKN1-215	ENST00000592960	CACNG2	Q9Y698	323 aa		12.5	□□□□□ -0.41
PKN1-215	ENST00000592960		F8VVB4	439 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960		F8VWA3	439 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	CLDN34	H7C241	214 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	GEMIN2	O14893	280 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	CTDSPL	O15194	276 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	SOCS1	O15524	211 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	NOS1AP	O75052	506 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	HLA-DQB1	P01920	261 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	GLRA1	P23415	457 aa		12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	ZFP36	P26651	326 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-215	ENST00000592960	BLVRB	P30043	206 aa	Predicted RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms