RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TPT1P13693 172 aaKnown RBP13.45□□□□□ -0.26
MBD1-227ENST00000592060 SPINK2P20155 84 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 CA6P23280 308 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 NUP62P37198 522 aaPredicted RBP13.45□□□□□ -0.26
MBD1-227ENST00000592060 NHLH1Q02575 133 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SP6Q3SY56 376 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 LIAT1Q6ZQX7 453 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 CCDC36Q8IYA8 594 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 MSI2Q96DH6 328 aaKnown RBP13.45□□□□□ -0.26
MBD1-227ENST00000592060 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 A0A1W2PR80 420 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 J3QT63 122 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 FGF16O43320 207 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 CEACAM4O75871 244 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 LYZL6O75951 148 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 DUSP1P28562 367 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 TGFBR3Q03167 851 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 TSC22D1Q15714 1073 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 GABRA6Q16445 453 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 Q6ZT83 130 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 C5orf24Q7Z6I8 188 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 GTF3AQ92664 365 aaKnown RBP13.44□□□□□ -0.26
MBD1-227ENST00000592060 CCDC120Q96HB5 630 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 DNTTIP1Q9H147 329 aa13.44□□□□□ -0.26
MBD1-227ENST00000592060 H7C1Q1 480 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 DEDDO75618 318 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 HKR1P10072 659 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 IL32P24001 234 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 KCNJ3P48549 501 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 IDH3GP51553 393 aaPredicted RBP13.43□□□□□ -0.26
MBD1-227ENST00000592060 UBE2NP61088 152 aaKnown RBP13.43□□□□□ -0.26
MBD1-227ENST00000592060 PPP1CBP62140 327 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 HERPUD1Q15011 391 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 IGFBP7Q16270 282 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 FAM209AQ5JX71 171 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 WDR86Q86TI4 376 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 BAP18Q8IXM2 172 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 CCDC71LQ8N9Z2 235 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 SUMF2Q8NBJ7 301 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 GLYATL2Q8WU03 294 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 SYT3Q9BQG1 590 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 SPACA1Q9HBV2 294 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 TRBV6-6A0A0A6YYG2 114 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 TRAV24A0A0B4J272 114 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 KRBOX1C9JBD0 128 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 LGALS8O00214 317 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 HSPB6O14558 160 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 SCTP09683 121 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 COX5AP20674 150 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 KIR2DL2P43627 348 aaPredicted RBP13.43□□□□□ -0.26
MBD1-227ENST00000592060 TCF15Q12870 199 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 DEFB109BQ30KR1 87 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 LDLRAD3Q86YD5 345 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 FAM58AQ8N1B3 248 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 C17orf78Q8N4C9 275 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 C9orf106Q8NAJ2 232 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 OR5T2Q8NGG2 359 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
MBD1-227ENST00000592060 IFT22Q9H7X7 185 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
MBD1-227ENST00000592060 TRDCB7Z8K6 153 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 RHBDL1O75783 438 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 TUSC2O75896 110 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
MBD1-227ENST00000592060 ERVS71-1P61550 626 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 MRPL49Q13405 166 aaKnown RBP13.42□□□□□ -0.26
MBD1-227ENST00000592060 ZNF585AQ6P3V2 769 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 ZNF880Q6PDB4 577 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 INO80CQ6PI98 192 aaPredicted RBP13.42□□□□□ -0.26
MBD1-227ENST00000592060 LYZL2Q7Z4W2 148 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 LHFPL5Q8TAF8 219 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 RTL8AQ9BWD3 113 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 OR2J1Q9GZK6 312 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 TMEM100Q9NV29 134 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 ATP23Q9Y6H3 246 aa13.42□□□□□ -0.26
MBD1-227ENST00000592060 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 KIR2DS1A0A191URI9 304 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 GLAP06280 429 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 GNRHRP30968 328 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 KIR2DS4P43632 304 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 RND3P61587 244 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 KIR2DS1Q14954 304 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 FAM76BQ5HYJ3 339 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 VWA1Q6PCB0 445 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 FAM185AQ8N0U4 392 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 LGI3Q8N145 548 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 NEK7Q8TDX7 302 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 WNT2BQ93097 391 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 SARAFQ96BY9 339 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 TP53RKQ96S44 253 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 RIMS4Q9H426 269 aaPredicted RBP13.41□□□□□ -0.26
MBD1-227ENST00000592060 RHOFQ9HBH0 211 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 TMA7Q9Y2S6 64 aaKnown RBP13.41□□□□□ -0.26
MBD1-227ENST00000592060 LRP5LA4QPB2 252 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 ZNF891A8MT65 544 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms