RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SLC6A1P30531 599 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 GLIPR1P48060 266 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 FUT6P51993 359 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 AQP4P55087 323 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 LRRC36Q1X8D7 754 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 DEFB136Q30KP8 78 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 BCDIN3DQ7Z5W3 292 aaKnown RBP12.55□□□□□ -0.4
DDX39A-216ENST00000591275 ENTHD1Q8IYW4 607 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 FAM58AQ8N1B3 248 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 MUC7Q8TAX7 377 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 CREB3L1Q96BA8 519 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 SLC25A19Q9HC21 320 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 ING3Q9NXR8 418 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 GLS2Q9UI32 602 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 MRM2Q9UI43 246 aaKnown RBP12.55□□□□□ -0.4
DDX39A-216ENST00000591275 SNX5Q9Y5X3 404 aa12.55□□□□□ -0.4
DDX39A-216ENST00000591275 TRBV2A0A0J9YWF9 115 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 CCL24O00175 119 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 GNGT2O14610 69 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 CCL1P22362 96 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 CD34P28906 385 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 ECI1P42126 302 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 POU3F4P49335 361 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 PRRX1P54821 245 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 AESQ08117 197 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 GK3PQ14409 553 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 HNF4GQ14541 408 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 CCDC144NLQ6NUI1 221 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 AMIGO2Q86SJ2 522 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 SLC35F2Q8IXU6 374 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 Q8IYB0 196 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 OR56B4Q8NH76 319 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 NRBF2Q96F24 287 aa12.54□□□□□ -0.4
DDX39A-216ENST00000591275 SEBOXQ9HB31 216 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-216ENST00000591275 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A18PA6NE21 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A16PA6NEW6 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A20PA6NIJ5 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A9PA6NNJ1 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A12PA8MX19 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A5PA8MXJ8 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 M0R129 80 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 SYT7O43581 403 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 GATBO75879 557 aaKnown RBP12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A15PP0C7V4 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A13PP0C7W8 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A14PP0C7W9 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 FAM90A24PP0C7X0 464 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 NFYBP25208 207 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 SLC35B1P78383 322 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 HES1Q14469 280 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 ZNF146Q15072 292 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 LCNL1Q6ZST4 164 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 CORO2AQ92828 525 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 TOMM40LQ969M1 308 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 RPEQ96AT9 228 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 CHST5Q9GZS9 411 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
DDX39A-216ENST00000591275 LINC01548A6NM66 108 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SH2D1BO14796 132 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 PRKYO43930 277 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 OR2H2O95918 312 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 CYB5AP00167 134 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 IGHV3-7P01780 117 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 TMEM11P17152 192 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 PTGFRP43088 359 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.41
DDX39A-216ENST00000591275 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 THNSL2Q86YJ6 484 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 DRAM1Q8N682 238 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 YIPF7Q8N8F6 280 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 TBX5Q99593 518 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 ADGRL4Q9HBW9 690 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 HUWE1Q7Z6Z7 4374 aaKnown RBP12.52□□□□□ -0.41
DDX39A-216ENST00000591275 DNAH7Q8WXX0 4024 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SACSQ9NZJ4 4579 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 SORL1Q92673 2214 aa12.52□□□□□ -0.41
DDX39A-216ENST00000591275 ODAMA1E959 279 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 SEC14L6B5MCN3 397 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 SERPINA3P01011 423 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 RPLP1P05386 114 aaKnown RBP12.51□□□□□ -0.41
DDX39A-216ENST00000591275 RBP2P50120 134 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-216ENST00000591275 ATP1B3P54709 279 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 CDC42P60953 191 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 SCN1BQ07699 218 aa12.51□□□□□ -0.41
DDX39A-216ENST00000591275 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms