RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CLVS1Q8IUQ0 354 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 FAM185AQ8N0U4 392 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 BCL6BQ8N143 479 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 ASCC1Q8N9N2 400 aaKnown RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 OR5D18Q8NGL1 313 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 C8orf46Q8TAG6 207 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 ZFAND2BQ8WV99 257 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 RGP1Q92546 391 aaPredicted RBP8.54□□□□□ -1.04
SDF2-208ENST00000589788 LHX4Q969G2 390 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 TBX15Q96SF7 602 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 BCL7BQ9BQE9 202 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 GLS2Q9UI32 602 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 STUB1Q9UNE7 303 aa8.54□□□□□ -1.04
SDF2-208ENST00000589788 IGHV1-69DA0A0B4J2H0 117 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 TRDV1A0A1B0GX56 115 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 F8VVB4 439 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 F8VWA3 439 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 ANGPTL7O43827 346 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 AIREO43918 545 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 PSPNO60542 156 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 SC5DO75845 299 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 IGHV1-69P01742 117 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 CHRM2P08172 466 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 TMEM225BP0DP42 221 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 FGF9P31371 208 aaPredicted RBP8.53□□□□□ -1.04
SDF2-208ENST00000589788 NPBWR2P48146 333 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 TMBIM6P55061 237 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
SDF2-208ENST00000589788 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
SDF2-208ENST00000589788 PPP3R1P63098 170 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 COL10A1Q03692 680 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 KISS1Q15726 138 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 GDPGP1Q6ZNW5 385 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 C9orf139Q6ZV77 190 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 FAM58AQ8N1B3 248 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 RAB2BQ8WUD1 216 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 THRSPQ92748 146 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 TMEM106AQ96A25 262 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 GPER1Q99527 375 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 TMED9Q9BVK6 235 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 FAM192AQ9GZU8 254 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 FAM234AQ9H0X4 552 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 RBFOX1Q9NWB1 397 aaKnown RBP8.53□□□□□ -1.04
SDF2-208ENST00000589788 TAS2R4Q9NYW5 299 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 CEPT1Q9Y6K0 416 aa8.53□□□□□ -1.04
SDF2-208ENST00000589788 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
SDF2-208ENST00000589788 TRBV5-5A0A0J9YX44 114 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 CENPVL3A0A0U1RRI6 287 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 M0R1W7 72 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 GABRPO00591 440 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 NOL3O60936 208 aaKnown RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 GPX5O75715 221 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 HAND1O96004 215 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 TK1P04183 234 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 RNASE1P07998 156 aaKnown RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 CALCBP10092 127 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 PRKACAP17612 351 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 GDNFP39905 211 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 ACTG1P63261 375 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 FABP5Q01469 135 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 BAMBIQ13145 260 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 Q499Y3 187 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 RUSC1-AS1Q66K80 236 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 TMEM91Q6ZNR0 172 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 C1orf122Q6ZSJ8 110 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 PDZD9Q8IXQ8 264 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 SAXO1Q8IYX7 474 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 ZSCAN4Q8NAM6 433 aaPredicted RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 OR4M1Q8NGD0 313 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 OR5D13Q8NGL4 314 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 OR13C5Q8NGS8 318 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 TBC1D15Q8TC07 691 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 PHYHIPQ92561 330 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 TMEM203Q969S6 136 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 CHCHD6Q9BRQ6 235 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 NAA50Q9GZZ1 169 aaKnown RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 OR51E2Q9H255 320 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 METTL8Q9H825 291 aaKnown RBP8.52□□□□□ -1.05
SDF2-208ENST00000589788 SIRT7Q9NRC8 400 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 C19orf12Q9NSK7 152 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 CKLFQ9UBR5 152 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 SSR3Q9UNL2 185 aa8.52□□□□□ -1.05
SDF2-208ENST00000589788 FBN1P35555 2871 aaKnown RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 IGKV1-12A0A0C4DH73 117 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PR64 198 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 DNAJC9-AS1A6NH13 148 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 K7N7A8 449 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 SH2D1BO14796 132 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 KDM4BO94953 1096 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms