RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZNF85Q03923 595 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 TMED1Q13445 227 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 LY6EQ16553 131 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 TMEM244Q5VVB8 128 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 MEDAGQ5VYS4 303 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 ZNF782Q6ZMW2 699 aaPredicted RBP6.72□□□□□ -1.33
DNMT1-219ENST00000589349 GDPGP1Q6ZNW5 385 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 LHFPL3Q86UP9 236 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 SATL1Q86VE3 508 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 IZUMO1Q8IYV9 350 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 ACBD7Q8N6N7 88 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 CD177Q8N6Q3 437 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 LY6G5BQ8NDX9 201 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 OR5D13Q8NGL4 314 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 TSEN15Q8WW01 171 aaKnown RBP6.72□□□□□ -1.33
DNMT1-219ENST00000589349 ITFG2Q969R8 447 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 RFT1Q96AA3 541 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 C4orf36Q96KX1 117 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 CEP19Q96LK0 163 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 Q96MT0 163 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 NKX3-1Q99801 234 aaPredicted RBP6.72□□□□□ -1.33
DNMT1-219ENST00000589349 FAM234AQ9H0X4 552 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 SLITRK2Q9H156 845 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 PPA2Q9H2U2 334 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 HEXA-AS1Q9H8Q6 139 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 S100A14Q9HCY8 104 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 AMBNQ9NP70 447 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 MAB21L2Q9Y586 359 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 POMT1Q9Y6A1 747 aa6.72□□□□□ -1.33
DNMT1-219ENST00000589349 M0R1W7 72 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 MAGEB3O15480 346 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 JTBO76095 146 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 FADS2O95864 444 aaKnown RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 ALPLP05186 524 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 HCKP08631 526 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 PGA5P0DJD9 388 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 CCL3L1P16619 93 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 PRKACAP17612 351 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 PRKACBP22694 351 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 IER3P46695 156 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 RBP2P50120 134 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 UBE2E1P51965 193 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 GBX2P52951 348 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 RPS16P62249 146 aaKnown RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 ACTA2P62736 377 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 ACTG2P63267 376 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 EFNB1P98172 346 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 SRSF4Q08170 494 aaKnown RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 UBE2V2Q15819 145 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 OLFML2AQ68BL7 652 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 KCTD20Q7Z5Y7 419 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 CALHM1Q8IU99 346 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 MKXQ8IYA7 352 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 PRSS35Q8N3Z0 413 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 TMEM86BQ8N661 226 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 Q8N7P7 452 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 OR5D18Q8NGL1 313 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 OR2G2Q8NGZ5 317 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 CYGBQ8WWM9 190 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 DYRK2Q92630 601 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 GPER1Q99527 375 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 DPCDQ9BVM2 203 aaPredicted RBP6.71□□□□□ -1.34
DNMT1-219ENST00000589349 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 CHST6Q9GZX3 395 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 COMMD4Q9H0A8 199 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 ABCB10Q9NRK6 738 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 USE1Q9NZ43 259 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 C1RLQ9NZP8 487 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 GSTK1Q9Y2Q3 226 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 PCDHGB5Q9Y5G0 923 aa6.71□□□□□ -1.34
DNMT1-219ENST00000589349 A0A1B0GUS0 222 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 LOC100130705A0A1B0GUX0 176 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 CLPSL1A2RUU4 121 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 DHRS7CA6NNS2 312 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 H3BNX3 289 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 H3BUX3 64 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 SIRPB1O00241 398 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 MPZL2O60487 215 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 PEX14O75381 377 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 SRSF10O75494 262 aaKnown RBP6.7□□□□□ -1.34
DNMT1-219ENST00000589349 HAND1O96004 215 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 IGLV3-1P01715 115 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 TK1P04183 234 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 ARG1P05089 322 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 TMEM225BP0DP42 221 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 ATF1P18846 271 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 BCL3P20749 454 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 AZGP1P25311 298 aaKnown RBP6.7□□□□□ -1.34
DNMT1-219ENST00000589349 PAX6P26367 422 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 KIR3DL2P43630 455 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 SNRPGP62308 76 aaKnown RBP6.7□□□□□ -1.34
DNMT1-219ENST00000589349 IL24Q13007 206 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 GRK1Q15835 563 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 FAM189A2Q15884 450 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 LPCAT4Q643R3 524 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 ENTHD1Q8IYW4 607 aa6.7□□□□□ -1.34
DNMT1-219ENST00000589349 CCDC54Q8NEL0 328 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms