RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 CLN3Q13286 438 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 HERPUD1Q15011 391 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 TMEM211Q6ICI0 200 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 Q8NFD4 153 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 GLYATL2Q8WU03 294 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
CNTD1-204ENST00000588408 WNT2BQ93097 391 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 NBEAQ8NFP9 2946 aa11.86□□□□□ -0.51
CNTD1-204ENST00000588408 LRP3O75074 770 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 RHBDL1O75783 438 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 CA6P23280 308 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 CCL11P51671 97 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 FGF12P61328 243 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 PLP2Q04941 152 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 PLEKHN1Q494U1 663 aaPredicted RBP11.85□□□□□ -0.51
CNTD1-204ENST00000588408 OR52M1Q8NGK5 317 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 IP6K3Q96PC2 410 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 PPYP01298 95 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 MBPP02686 304 aaPredicted RBP11.85□□□□□ -0.51
CNTD1-204ENST00000588408 ERVS71-1P61550 626 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 FBXW9Q5XUX1 488 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
CNTD1-204ENST00000588408 NARS2Q96I59 477 aaKnown RBP11.85□□□□□ -0.51
CNTD1-204ENST00000588408 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
CNTD1-204ENST00000588408 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
CNTD1-204ENST00000588408 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 HS3ST1O14792 307 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
CNTD1-204ENST00000588408 DEDDO75618 318 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 RPL12P30050 165 aaKnown RBP11.84□□□□□ -0.51
CNTD1-204ENST00000588408 APLNRP35414 380 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 TNFSF10P50591 281 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 SOX8P57073 446 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
CNTD1-204ENST00000588408 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 ERGIC1Q969X5 290 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 C18orf12Q96KH6 178 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 Q9N2K0 584 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 TMEM100Q9NV29 134 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 AMDHD2Q9Y303 409 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 MEMO1Q9Y316 297 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 TRAPPC2LH3BP13 241 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 NAPSAO96009 420 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 IFNA21P01568 189 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 GNRHRP30968 328 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 NAAAQ02083 359 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 GALNT14Q96FL9 552 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 RSRP1Q9BUV0 290 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 TMEM231Q9H6L2 316 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 KCNIP3Q9Y2W7 256 aa11.84□□□□□ -0.51
CNTD1-204ENST00000588408 GLP1RP43220 463 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 HERV-K104P61576 105 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 OR5A2Q8NGI9 324 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 SECTM1Q8WVN6 248 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 RDH5Q92781 318 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 PRRX2Q99811 253 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 DNTTIP1Q9H147 329 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.52
CNTD1-204ENST00000588408 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 ZNF318Q5VUA4 2279 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 TRAV39A0A0B4J263 110 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 K7EPK0 472 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 LYZL6O75951 148 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 FTH1P19P0C7X4 201 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 PET100P0DJ07 73 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 SELEP16581 610 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 ID4P47928 161 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 TMEM33P57088 247 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 POLR2GP62487 172 aaKnown RBP eCLIP11.83□□□□□ -0.52
CNTD1-204ENST00000588408 HOXA4Q00056 320 aaPredicted RBP11.83□□□□□ -0.52
CNTD1-204ENST00000588408 DEFA5Q01523 94 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 TFAP2EQ6VUC0 442 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 PIP4P1Q86T03 277 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 WDR86Q86TI4 376 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 LDLRAD3Q86YD5 345 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 FAM71E2Q8N5Q1 922 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 SUMF2Q8NBJ7 301 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
CNTD1-204ENST00000588408 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
CNTD1-204ENST00000588408 FBXO24O75426 580 aa11.82□□□□□ -0.52
CNTD1-204ENST00000588408 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms