RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ESRP2Q9H6T0 727 aaKnown RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 FN3KRPQ9HA64 309 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 C1orf123Q9NWV4 160 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 NDRG3Q9UGV2 375 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 TPRP12270 2363 aaKnown RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 CEACAM18A8MTB9 384 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 SH2D1BO14796 132 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 PTBP3O95758 552 aaKnown RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 OR2H2O95918 312 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 GLRA1P23415 457 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF81P51508 661 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 NKX2-5P52952 324 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 AADACL3Q5VUY0 350 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 ADAM5Q6NVV9 412 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 SLC25A42Q86VD7 318 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 OR2V2Q96R30 315 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 RIMS4Q9H426 269 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 ATP23Q9Y6H3 246 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 RELNP78509 3460 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 SIRPB1O00241 398 aa16.77■□□□□ 0.28
TRIM47-204ENST00000587339 WNT9BO14905 357 aa16.77■□□□□ 0.28
TRIM47-204ENST00000587339 ANXA3P12429 323 aa16.77■□□□□ 0.28
TRIM47-204ENST00000587339 SNTB1Q13884 538 aaKnown RBP16.77■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF431Q8TF32 576 aaPredicted RBP16.77■□□□□ 0.28
TRIM47-204ENST00000587339 LRRC46Q96FV0 321 aa16.77■□□□□ 0.28
TRIM47-204ENST00000587339 SCGB3A2Q96PL1 93 aa16.77■□□□□ 0.28
TRIM47-204ENST00000587339 SRSF7Q16629 238 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 PAN3Q58A45 887 aaKnown RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 MEGF10Q96KG7 1140 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 ZNF2Q9BSG1 426 aaPredicted RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 OR14J1Q9UGF5 321 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 GLS2Q9UI32 602 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 GPR132Q9UNW8 380 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 OR5H14A6NHG9 310 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 HAND1O96004 215 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 HLA-AP01891 365 aaKnown RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 FPR2P25090 351 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 DHRS2Q13268 280 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 FAHD2BQ6P2I3 314 aaPredicted RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 ACP7Q6ZNF0 438 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 Q6ZS49 121 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 LRRC29Q8WV35 223 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 FAHD2AQ96GK7 314 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 Q9N2K0 584 aa16.76■□□□□ 0.27
TRIM47-204ENST00000587339 ERRFI1Q9UJM3 462 aaPredicted RBP16.76■□□□□ 0.27
TRIM47-204ENST00000587339 MEIKINA0A087WXM9 373 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 OR4A8P0C604 315 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 GSTT2P0CG29 244 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 AKR1C4P17516 323 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 HOXA4Q00056 320 aaPredicted RBP16.75■□□□□ 0.27
TRIM47-204ENST00000587339 ADIPOQQ15848 244 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 SMIM21Q3B7S5 101 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 NCMAPQ5T1S8 102 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 PEG10Q86TG7 708 aaKnown RBP16.75■□□□□ 0.27
TRIM47-204ENST00000587339 SPICQ8N5J4 248 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 UXS1Q8NBZ7 420 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 ADAD2Q8NCV1 583 aaKnown RBP16.75■□□□□ 0.27
TRIM47-204ENST00000587339 KCNJ16Q9NPI9 418 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 MGAT4CQ9UBM8 478 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 ZDHHC8Q9ULC8 765 aa16.75■□□□□ 0.27
TRIM47-204ENST00000587339 GRNP28799 593 aaKnown RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 MDH2P40926 338 aaKnown RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 ECI1P42126 302 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 UBE2MP61081 183 aaKnown RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 BAMBIQ13145 260 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 CDSNQ15517 529 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 SURF2Q15527 256 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 ZNF660Q6AZW8 331 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 DHRS11Q6UWP2 260 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 PLPPR2Q96GM1 343 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 C5orf66Q9H5L9 145 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 TREM2Q9NZC2 230 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 COL6A6A6NMZ7 2263 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 KIR2DS1A0A191URI9 304 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 VSTM5A8MXK1 200 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 KIR2DS4P43632 304 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 TAS2R31P59538 309 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 PPP1R1AQ13522 171 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 KIR2DS1Q14954 304 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 NOXA1Q86UR1 476 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 LINC01560Q8TB33 94 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 PRR7Q8TB68 274 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 MRPL30Q8TCC3 161 aaKnown RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 ITLN1Q8WWA0 313 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 ZNF436Q9C0F3 470 aaPredicted RBP16.74■□□□□ 0.27
TRIM47-204ENST00000587339 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 IL19Q9UHD0 177 aa16.74■□□□□ 0.27
TRIM47-204ENST00000587339 NBASA2RRP1 2371 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 KNG1P01042 644 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 IGHV1-46P01743 117 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 C1QBP02746 253 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 TNFSF4P23510 183 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 VAMP1P23763 118 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 CFHR2P36980 270 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 CEBPDP49716 269 aaPredicted RBP16.73■□□□□ 0.27
TRIM47-204ENST00000587339 IL13RA1P78552 427 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 TNFAIP6P98066 277 aaPredicted RBP16.73■□□□□ 0.27
TRIM47-204ENST00000587339 SORDQ00796 357 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 SPRNQ5BIV9 151 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms