RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 RNF166Q96A37 237 aaPredicted RBP12.89□□□□□ -0.35
NPC1-205ENST00000587163 RFT1Q96AA3 541 aa12.89□□□□□ -0.35
NPC1-205ENST00000587163 CREB3L1Q96BA8 519 aa12.89□□□□□ -0.35
NPC1-205ENST00000587163 COQ2Q96H96 371 aa12.89□□□□□ -0.35
NPC1-205ENST00000587163 THTPAQ9BU02 230 aa12.89□□□□□ -0.35
NPC1-205ENST00000587163 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
NPC1-205ENST00000587163 LSM4Q9Y4Z0 139 aaKnown RBP12.89□□□□□ -0.35
NPC1-205ENST00000587163 LOC107986453A0A1B0GWG9 222 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 CYB5AP00167 134 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 CALB2P22676 271 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 PTGFRP43088 359 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 SCN1BQ07699 218 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 CCDC144NLQ6NUI1 221 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 OR4D6Q8NGJ1 314 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 OR56B4Q8NH76 319 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 CHPT1Q8WUD6 406 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 DNAJC9Q8WXX5 260 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 PP6455Q8WZ26 134 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 NRBF2Q96F24 287 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 RAX2Q96IS3 184 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
NPC1-205ENST00000587163 FUOMA2VDF0 154 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 ZAR1LA6NP61 321 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 SERPINE3A8MV23 424 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 IGHV3-7P01780 117 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 CGB3P0DN86 165 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 CGB7P0DN87 165 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 ATF1P18846 271 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 NFYBP25208 207 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 HNF4GQ14541 408 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 Q6P435 159 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 SPATA24Q86W54 205 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 LEAP2Q969E1 77 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 FGGYQ96C11 551 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 C10orf35Q96D05 121 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 SPACA5Q96QH8 159 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 PRR25Q96S07 402 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 COMMD4Q9H0A8 199 aa12.87□□□□□ -0.35
NPC1-205ENST00000587163 PPIL3Q9H2H8 161 aaKnown RBP12.87□□□□□ -0.35
NPC1-205ENST00000587163 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
NPC1-205ENST00000587163 SULT1C4O75897 302 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 KDM4BO94953 1096 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 ZNF44P15621 663 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
NPC1-205ENST00000587163 SLC6A1P30531 599 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
NPC1-205ENST00000587163 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
NPC1-205ENST00000587163 KRBOX4Q5JUW0 171 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 GID4Q8IVV7 300 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 OR10H4Q8NGA5 316 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 OR9G1Q8NH87 305 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 TOMM40LQ969M1 308 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 RPEQ96AT9 228 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 KIRREL1Q96J84 757 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 ASCL2Q99929 193 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 STAB2Q8WWQ8 2551 aa12.86□□□□□ -0.35
NPC1-205ENST00000587163 TCRBV3S1A0A5B6 114 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 CCL24O00175 119 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
NPC1-205ENST00000587163 RAMP3O60896 148 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 CSN2P05814 226 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 TMEM11P17152 192 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 PRKACBP22694 351 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 RAB25P57735 213 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 ISL1P61371 349 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 HES1Q14469 280 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 TP53I3Q53FA7 332 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 UTS2BQ765I0 119 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 UTP4Q969X6 686 aaKnown RBP12.85□□□□□ -0.35
NPC1-205ENST00000587163 KRT84Q9NSB2 600 aa12.85□□□□□ -0.35
NPC1-205ENST00000587163 ZMAT5Q9UDW3 170 aaKnown RBP12.85□□□□□ -0.35
NPC1-205ENST00000587163 WARS2Q9UGM6 360 aaKnown RBP12.85□□□□□ -0.35
NPC1-205ENST00000587163 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 J3QR06 171 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 IGHG2P01859 326 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 UBCP0CG48 685 aaKnown RBP12.84□□□□□ -0.35
NPC1-205ENST00000587163 ZNF85Q03923 595 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 CDK5R1Q15078 307 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 DEFB136Q30KP8 78 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 LCNL1Q6ZST4 164 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 STPG2Q8N412 459 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 PCDHB16Q9NRJ7 776 aa12.84□□□□□ -0.35
NPC1-205ENST00000587163 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms