RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RBM39Q14498 530 aaKnown RBP9.35□□□□□ -0.91
BRCA1-225ENST00000586385 DRAM1Q8N682 238 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 RFT1Q96AA3 541 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 KIRREL1Q96J84 757 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 IL4I1Q96RQ9 567 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 ASCL2Q99929 193 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 TEX12Q9BXU0 123 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 ZFP57Q9NU63 452 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 ING3Q9NXR8 418 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 KIAA2026Q5HYC2 2103 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
BRCA1-225ENST00000586385 METTL15A6NJ78 407 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 ZAR1LA6NP61 321 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 NUDT19A8MXV4 375 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 SLC33A1O00400 549 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-225ENST00000586385 KDM4BO94953 1096 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 IGHV3-7P01780 117 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 IGHG2P01859 326 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 KRT8P05787 483 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 CEACAM3P40198 252 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 PTGFRP43088 359 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 ATP1B3P54709 279 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 MTCP1P56278 107 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 GNGT1P63211 74 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 ZNF85Q03923 595 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 DCTN2Q13561 401 aaKnown RBP9.34□□□□□ -0.91
BRCA1-225ENST00000586385 CDK5R1Q15078 307 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 DEFB136Q30KP8 78 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 CCDC144NLQ6NUI1 221 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 LCNL1Q6ZST4 164 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 ZNF695Q8IW36 515 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 OR10AC1Q8NH08 325 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 CHPT1Q8WUD6 406 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 PP6455Q8WZ26 134 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 LEAP2Q969E1 77 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 UTP4Q969X6 686 aaKnown RBP9.34□□□□□ -0.91
BRCA1-225ENST00000586385 C10orf35Q96D05 121 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 SPACA5Q96QH8 159 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 EXOSC4Q9NPD3 245 aaKnown RBP9.34□□□□□ -0.91
BRCA1-225ENST00000586385 SCOCQ9UIL1 159 aa9.34□□□□□ -0.91
BRCA1-225ENST00000586385 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 KBTBD11-OT1A0A1B0GTJ5 212 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 TCRBV3S1A0A5B6 114 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 SERPINE3A8MV23 424 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 CCL24O00175 119 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 TOR1AO14656 332 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 SH2D1BO14796 132 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 SULT1C4O75897 302 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 RPLP1P05386 114 aaKnown RBP9.33□□□□□ -0.92
BRCA1-225ENST00000586385 FAM106CPP0CH98 169 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 NFYBP25208 207 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 SLC6A1P30531 599 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 MNDAP41218 407 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 ARHGDIBP52566 201 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 PRRX1P54821 245 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 HNF4GQ14541 408 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 KPNB1Q14974 876 aaKnown RBP9.33□□□□□ -0.92
BRCA1-225ENST00000586385 ATXN7L3Q14CW9 347 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-225ENST00000586385 KRBOX4Q5JUW0 171 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 STPG2Q8N412 459 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 OR5D18Q8NGL1 313 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 OR13A1Q8NGR1 328 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 OR9G1Q8NH87 305 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 TOMM40LQ969M1 308 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 RPEQ96AT9 228 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 CREB3L1Q96BA8 519 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 NRBF2Q96F24 287 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 THTPAQ9BU02 230 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 LINC00574Q9H8X3 128 aa9.33□□□□□ -0.92
BRCA1-225ENST00000586385 GAR1Q9NY12 217 aaKnown RBP9.33□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-225ENST00000586385 J3QR06 171 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 FGF16O43320 207 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 RAMP3O60896 148 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 SERPINA3P01011 423 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 OR2T7P0C7T2 308 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 TMEM11P17152 192 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 CALB2P22676 271 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 NANOS3P60323 173 aaKnown RBP9.32□□□□□ -0.92
BRCA1-225ENST00000586385 SCN1BQ07699 218 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 TP53I3Q53FA7 332 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 UNQ9370/PRO34162Q6UXP9 181 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 LHFPL2Q6ZUX7 228 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 GID4Q8IVV7 300 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 Q8N6K4 173 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 OR4D6Q8NGJ1 314 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 OR51A4Q8NGJ6 313 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 OR2G2Q8NGZ5 317 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 FGGYQ96C11 551 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 RBMXL1Q96E39 390 aaKnown RBP9.32□□□□□ -0.92
BRCA1-225ENST00000586385 OPALINQ96PE5 141 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 MBOAT4Q96T53 435 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms