RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RNF144BQ7Z419 303 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 ZNF329Q86UD4 541 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 CCDC197Q8NCU1 140 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 FGGYQ96C11 551 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 COMMD4Q9H0A8 199 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.57
SDF2-202ENST00000585428 KRT84Q9NSB2 600 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 PCDHGB5Q9Y5G0 923 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 LOC107986453A0A1B0GWG9 222 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 ODAMA1E959 279 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 G3V2T6 193 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 KDM4BO94953 1096 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 MT-ND2P03891 347 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 ISG15P05161 165 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 UBCP0CG48 685 aaKnown RBP11.45□□□□□ -0.58
SDF2-202ENST00000585428 MNDAP41218 407 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 POU3F4P49335 361 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 SNU13P55769 128 aaKnown RBP11.45□□□□□ -0.58
SDF2-202ENST00000585428 ZNF85Q03923 595 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 TMEM244Q5VVB8 128 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 CCDC144NLQ6NUI1 221 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 LHFPL2Q6ZUX7 228 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 OR51D1Q8NGF3 324 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 OR4D6Q8NGJ1 314 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 COQ2Q96H96 371 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
SDF2-202ENST00000585428 RHOFQ9HBH0 211 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 ZFP57Q9NU63 452 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 FRRS1LQ9P0K9 344 aa11.45□□□□□ -0.58
SDF2-202ENST00000585428 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
SDF2-202ENST00000585428 GYG2O15488 501 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 APOL3O95236 402 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 SLC6A1P30531 599 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
SDF2-202ENST00000585428 MYCNOSP40205 109 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 OR3A4PP47883 348 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 RPL23AP62750 156 aaKnown RBP11.44□□□□□ -0.58
SDF2-202ENST00000585428 TMED1Q13445 227 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 KHDC1LQ5JSQ8 128 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 C9orf152Q5JTZ5 239 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 FDX2Q6P4F2 183 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 C18orf65Q6ZTR6 163 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 OR2W3Q7Z3T1 314 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 SAXO1Q8IYX7 474 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 CHST4Q8NCG5 386 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 OR10H4Q8NGA5 316 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 OR2G2Q8NGZ5 317 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 SPSB1Q96BD6 273 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 SLC7A6OSQ96CW6 309 aaPredicted RBP11.44□□□□□ -0.58
SDF2-202ENST00000585428 MBOAT4Q96T53 435 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 P2RX4Q99571 388 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
SDF2-202ENST00000585428 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
SDF2-202ENST00000585428 CCDC159P0C7I6 412 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 PTGFRP43088 359 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 SCN1BQ07699 218 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 CDK5R1Q15078 307 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 ATP6AP1Q15904 470 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 TP53I3Q53FA7 332 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 KRBOX4Q5JUW0 171 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 KCTD20Q7Z5Y7 419 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 OR9G1Q8NH87 305 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 CHPT1Q8WUD6 406 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 DPF1Q92782 380 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 EME1Q96AY2 570 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 KIRREL1Q96J84 757 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 NOL4LQ96MY1 436 aaPredicted RBP11.43□□□□□ -0.58
SDF2-202ENST00000585428 OPALINQ96PE5 141 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 GNG8Q9UK08 70 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 HSPE1-MOB4S4R3N1 261 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
SDF2-202ENST00000585428 J3QR06 171 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 DEGS1O15121 323 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 ATP6V1E1P36543 226 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 NANOS3P60323 173 aaKnown RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 RBM39Q14498 530 aaKnown RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 DNAL1Q4LDG9 190 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 UNQ9370/PRO34162Q6UXP9 181 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 ZNF565Q8N9K5 539 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 OR51T1Q8NGJ9 327 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 RFT1Q96AA3 541 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 HRASLS5Q96KN8 279 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 SPACA5Q96QH8 159 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 ZNF649Q9BS31 505 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 GABARAPL1Q9H0R8 117 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 PPIL3Q9H2H8 161 aaKnown RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 PCDHB16Q9NRJ7 776 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
SDF2-202ENST00000585428 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
SDF2-202ENST00000585428 A0A1W2PPI3 338 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms