RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FLRT3Q9NZU0 649 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 RCC2Q9P258 522 aaKnown RBP11.52□□□□□ -0.56
RNF43-208ENST00000584437 EVPLQ92817 2033 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 TSPO2Q5TGU0 170 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 CST9Q5W186 159 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 FDX2Q6P4F2 183 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 ASB5Q8WWX0 329 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 TRMT61AQ96FX7 289 aaKnown RBP11.52□□□□□ -0.57
RNF43-208ENST00000584437 THYN1Q9P016 225 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 LRP5O75197 1615 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 RREB1Q92766 1687 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 METTL12A8MUP2 240 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 DEFB108AA8MXU0 73 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 SPRY3O43610 288 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 ORM1P02763 201 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 CXCL2P19875 107 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 ZXDAP98168 799 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 CBLN3Q6UW01 205 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
RNF43-208ENST00000584437 R3HDM4Q96D70 268 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 ISLRO14498 428 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 PITX3O75364 302 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 GZMMP51124 257 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 SPNS3Q6ZMD2 512 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 TGIF2LXQ8IUE1 241 aa11.52□□□□□ -0.57
RNF43-208ENST00000584437 TRGV5A0A0B4J1U4 118 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 CORTO00230 105 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 HAND1O96004 215 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 P01737 135 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 ACAA2P42765 397 aaKnown RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 HERVK_113P61574 105 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 GNB2P62879 340 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TRAV8-7A0A075B6U6 113 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 hADV38S2A0JD32 116 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 PAGE4O60829 102 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 SMPD2O60906 423 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 CT62P0C5K7 136 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 GAPTQ8N292 157 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 OR1L1Q8NH94 360 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 PLPPR2Q96GM1 343 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 WASHC3Q9Y3C0 194 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 PAM16Q9Y3D7 125 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 HYAL3O43820 417 aaPredicted RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 CXorf1O96002 111 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 SRFP11831 508 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 GNG10P50151 68 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TCL1AP56279 114 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 FZD5Q13467 585 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 PRSS41Q7RTY9 318 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ANKRD37Q7Z713 158 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 GCGP01275 180 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 MYOGP15173 224 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 PSG5Q15238 335 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 CD226Q15762 336 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TMEM255AQ5JRV8 349 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 KHDC1LQ5JSQ8 128 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
RNF43-208ENST00000584437 D2HGDHQ8N465 521 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 OR11G2Q8NGC1 345 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 COX14Q96I36 57 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 ELOVL1Q9BW60 279 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 TBX21Q9UL17 535 aa11.51□□□□□ -0.57
RNF43-208ENST00000584437 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 GALNSP34059 522 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 OR10AC1Q8NH08 325 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 HELTA6NFD8 242 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 CSN3P07498 182 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 SRD5A2P31213 254 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 METAP1P53582 386 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 SERF2P84101 59 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 DOLPP1Q86YN1 238 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 RPEQ96AT9 228 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 OR51M1Q9H341 326 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 VSIG4Q9Y279 399 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 OOEPA6NGQ2 149 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 CA11O75493 328 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 CYB5R3P00387 301 aaPredicted RBP11.5□□□□□ -0.57
RNF43-208ENST00000584437 APCSP02743 223 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 PSMB2P49721 201 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 MMP16P51512 607 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 TRA2AQ13595 282 aaKnown RBP eCLIP11.5□□□□□ -0.573e-8■■□□□ 14.5
RNF43-208ENST00000584437 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
RNF43-208ENST00000584437 LYZL2Q7Z4W2 148 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms