RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ERVK11-1P61568 191 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 DGUOKQ16854 277 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 HSD17B12Q53GQ0 312 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 ANGPTL6Q8NI99 470 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 TNFAIP8L1Q8WVP5 186 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 C17orf50Q8WW18 174 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 TNFRSF14Q92956 283 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 EMG1Q92979 244 aaKnown RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 C12orf43Q96C57 262 aaKnown RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 CPNE2Q96FN4 548 aaPredicted RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 DCTN5Q9BTE1 182 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 RBFOX1Q9NWB1 397 aaKnown RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 NDUFB11Q9NX14 153 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 DNAH3Q8TD57 4116 aa12.77□□□□□ -0.36
SKA2-209ENST00000583976 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 ACAA1P09110 424 aaPredicted RBP12.77□□□□□ -0.37
SKA2-209ENST00000583976 PRKACAP17612 351 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 SRMP19623 302 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 PAX6P26367 422 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 METAP1DQ6UB28 335 aaPredicted RBP12.77□□□□□ -0.37
SKA2-209ENST00000583976 SLC36A1Q7Z2H8 476 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 JAGN1Q8N5M9 183 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 OR10K1Q8NGX5 313 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 C16orf95Q9H693 158 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 IL36RNQ9UBH0 155 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
SKA2-209ENST00000583976 MEIOCA2RUB1 952 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 BTBD17A6NE02 478 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 NDUFB3O43676 98 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 CDRT1O95170 752 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 UCHL1P09936 223 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
SKA2-209ENST00000583976 DUSP1P28562 367 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 PRDX2P32119 198 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 PTGFRP43088 359 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 C2orf68Q2NKX9 166 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 SYT6Q5T7P8 510 aaPredicted RBP12.76□□□□□ -0.37
SKA2-209ENST00000583976 FAM58AQ8N1B3 248 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 CD177Q8N6Q3 437 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 MUL1Q969V5 352 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 NR1H4Q96RI1 486 aaPredicted RBP12.76□□□□□ -0.37
SKA2-209ENST00000583976 PPA2Q9H2U2 334 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
SKA2-209ENST00000583976 GSTK1Q9Y2Q3 226 aa12.76□□□□□ -0.37
SKA2-209ENST00000583976 G3V4G9 280 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 ARL6IP5O75915 188 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 TSPAN9O75954 239 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 KDM4BO94953 1096 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 PAHP00439 452 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 RSU1Q15404 277 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
SKA2-209ENST00000583976 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 ZNF788Q6ZQV5 615 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 LRRTM1Q86UE6 522 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 Q8IYB0 196 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 SAXO1Q8IYX7 474 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 CMTM4Q8IZR5 234 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 C11orf44Q8N8P7 122 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 S100A13Q99584 98 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 SLC25A10Q9UBX3 287 aaPredicted RBP12.75□□□□□ -0.37
SKA2-209ENST00000583976 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
SKA2-209ENST00000583976 TRDV1A0A1B0GX56 115 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 MEGF11A6BM72 1044 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 H3BUX3 64 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 HTR3BO95264 441 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 PRB2P02812 416 aaPredicted RBP12.74□□□□□ -0.37
SKA2-209ENST00000583976 CSF1P09603 554 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 CD36P16671 472 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 CAPZA1P52907 286 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 COL10A1Q03692 680 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 LY6EQ16553 131 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 C22orf42Q6IC83 251 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 CD200R1LQ6Q8B3 271 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 PXT1Q8NFP0 134 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 OR4D6Q8NGJ1 314 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 PPP1R35Q8TAP8 253 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 PHYHIPQ92561 330 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 MED30Q96HR3 178 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 METTL9Q9H1A3 318 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 OR51E2Q9H255 320 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
SKA2-209ENST00000583976 MRPS28Q9Y2Q9 187 aaKnown RBP12.74□□□□□ -0.37
SKA2-209ENST00000583976 AK6Q9Y3D8 172 aaKnown RBP12.74□□□□□ -0.37
SKA2-209ENST00000583976 MAB21L2Q9Y586 359 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms