RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 LILRB2Q8N423 598 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 CPNE4Q96A23 557 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 MOB3AQ96BX8 217 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 PLEKHF2Q9H8W4 249 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 BCO1Q9HAY6 547 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 FGF21Q9NSA1 209 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 P4HTMQ9NXG6 502 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 BRWD1Q9NSI6 2320 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 MPPED1O15442 326 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 TLX3O43711 291 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 HLA-HP01893 362 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 CD200P41217 278 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 FGF8P55075 233 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 PKIAP61925 76 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 HLA-DRB3P79483 266 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 DPPA2Q7Z7J5 298 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 TBC1D26Q86UD7 250 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 CCDC71LQ8N9Z2 235 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 BORCS8Q96FH0 119 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 SLC25A31Q9H0C2 315 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 FAM86C1Q9NVL1 165 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 ST3GAL6Q9Y274 331 aa8.28□□□□□ -1.08
PPP4R1-222ENST00000582594 SDK2Q58EX2 2172 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 ABCA7Q8IZY2 2146 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 RPL36A-HNRNPH2H7BZ11 118 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 BCAT2O15382 392 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 SLC31A2O15432 143 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNHIT1O43257 154 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 PPYP01298 95 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 SNRPCP09234 159 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 MMP9P14780 707 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 DTYMKP23919 212 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 IL2RGP31785 369 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 NKAIN1Q4KMZ8 207 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 THNSL2Q86YJ6 484 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 NFAM1Q8NET5 270 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 MISP3Q96FF7 219 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 AQP7P3A6NL99 342 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 HSPB1P04792 205 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 GNRHRP30968 328 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 PLA2G5P39877 138 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 CLEC12BQ2HXU8 276 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 C1orf87Q8N0U7 546 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 OR2M3Q8NG83 312 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 HIST1H2BLQ99880 126 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 ANGPTL4Q9BY76 406 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-222ENST00000582594 PRUNE2Q8WUY3 3088 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 IGHV1OR21-1A0A087WYE8 117 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 G3V3Y1 287 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 CHST1O43916 411 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 LCATP04180 440 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 CTSSP25774 331 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 CD38P28907 300 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 TMEM267Q0VDI3 215 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF100Q8IYN0 542 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 OSR2Q8N2R0 312 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 IL22RA1Q8N6P7 574 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 NECAP1Q8NC96 275 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 NABP1Q96AH0 204 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 TMEM222Q9H0R3 208 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 UCK1Q9HA47 277 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SLC7A10Q9NS82 523 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 ARHGAP21Q5T5U3 1957 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 A0A087WZY1 265 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 HSPB6O14558 160 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 OR7C1O76099 320 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SHBQ15464 509 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 HIST2H3PS2Q5TEC6 136 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 WDR25Q64LD2 544 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF774Q6NX45 483 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SLC35E3Q7Z769 313 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 SPTSSAQ969W0 71 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF501Q96CX3 271 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
PPP4R1-222ENST00000582594 LOC102723971A0A1B0GUV8 181 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 TERTO14746 1132 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 TUBG1P23258 451 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms