RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CPT2P23786 658 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 GCH1P30793 250 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 RCVRNP35243 200 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 WNT5AP41221 380 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 VEGFCP49767 419 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 ZNF83P51522 516 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 UCP2P55851 309 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 RPS27AP62979 156 aaKnown RBP8.65□□□□□ -1.02
SS18-221ENST00000582448 PRDX4Q13162 271 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
SS18-221ENST00000582448 CARTPTQ16568 116 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 CEACAM21Q3KPI0 293 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 OR10K2Q6IF99 312 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 FBXW12Q6X9E4 464 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 MUC15Q8N387 334 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 OR1J1Q8NGS3 322 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 RAB3CQ96E17 227 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 MRPS24Q96EL2 167 aaKnown RBP8.65□□□□□ -1.02
SS18-221ENST00000582448 C1QTNF6Q9BXI9 259 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 OR51B6Q9H340 312 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 KCNK15Q9H427 330 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 NKIRAS2Q9NYR9 191 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 NPAP1Q9NZP6 1156 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 H7C417 338 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 M0R1B8 84 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 LANCL1O43813 399 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 DHFRP00374 187 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 CRYAAP02489 173 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MGMTP16455 207 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 SERPINA2P20848 420 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 RFX2P48378 723 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 GZMKP49863 264 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 GNG2P59768 71 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MRPS15P82914 257 aaKnown RBP8.64□□□□□ -1.03
SS18-221ENST00000582448 QRFPP83859 136 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 PLA2G7Q13093 441 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 UNC119Q13432 240 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 PCGF3Q3KNV8 242 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 C3orf36Q3SXR2 165 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 Q6ZTK2 550 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 RFPL4BQ6ZWI9 263 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 Q8N1X5 172 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 ZSCAN4Q8NAM6 433 aaPredicted RBP8.64□□□□□ -1.03
SS18-221ENST00000582448 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 OR5AN1Q8NGI8 311 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 OR5A2Q8NGI9 324 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 OR8S1Q8NH09 359 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 CMBLQ96DG6 245 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 ZNF75AQ96N20 296 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 DHRS9Q9BPW9 319 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MICU1Q9BPX6 476 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MRPL15Q9P015 296 aaKnown RBP8.64□□□□□ -1.03
SS18-221ENST00000582448 NLKQ9UBE8 527 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 MTFP1Q9UDX5 166 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
SS18-221ENST00000582448 RBMX2Q9Y388 322 aaKnown RBP8.64□□□□□ -1.03
SS18-221ENST00000582448 NUBP2Q9Y5Y2 271 aa8.64□□□□□ -1.03
SS18-221ENST00000582448 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 SPNP16150 400 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 HNF1AP20823 631 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 SLC6A1P30531 599 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 CBX5P45973 191 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 SRP9P49458 86 aaKnown RBP8.63□□□□□ -1.03
SS18-221ENST00000582448 TAS2R19P59542 299 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 FOXL1Q12952 345 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 PDZK1IP1Q13113 114 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
SS18-221ENST00000582448 PNLIPRP3Q17RR3 467 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 ZNF718Q3SXZ3 478 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 SPATA46Q5T0L3 261 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 PAQR4Q8N4S7 273 aaPredicted RBP8.63□□□□□ -1.03
SS18-221ENST00000582448 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 PXT1Q8NFP0 134 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 RADILQ96JH8 1075 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 RNF170Q96K19 258 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 NEDD4LQ96PU5 975 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 BANF2Q9H503 90 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
SS18-221ENST00000582448 KLK11Q9UBX7 282 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms