RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 AK3Q9UIJ7 227 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 NUBP2Q9Y5Y2 271 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 CADP27708 2225 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 INMT-MINDY4F8WBC2 141 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 H3BUI4 141 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 M0QYG6 137 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 NXPH2O95156 264 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 OR4A8P0C604 315 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 DUSP1P28562 367 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 ADIPOQQ15848 244 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 OR52W1Q6IF63 320 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 C11orf53Q8IXP5 236 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 CIARTQ8N365 385 aaPredicted RBP10.61□□□□□ -0.71
SRSF1-204ENST00000581979 POC1AQ8NBT0 407 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 OR4D10Q8NGI6 311 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 FBXW5Q969U6 566 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 CMSS1Q9BQ75 279 aaKnown RBP10.61□□□□□ -0.71
SRSF1-204ENST00000581979 NRIP2Q9BQI9 281 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 OCSTAMPQ9BR26 566 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 ST6GALNAC5Q9BVH7 336 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 TLNRD1Q9H1K6 362 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 C1orf123Q9NWV4 160 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 TRAV6A0A075B6T7 132 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 hCG_1807616A0A1W2PRN6 198 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 SHISA9B4DS77 424 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 C3orf80F5H4A9 247 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 CD74P04233 296 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 ERVK11-1P61568 191 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 MEF2DQ14814 521 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 MPPED2Q15777 294 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
SRSF1-204ENST00000581979 FIP1L1Q6UN15 594 aaKnown RBP10.6□□□□□ -0.71
SRSF1-204ENST00000581979 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 HOGA1Q86XE5 327 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 OR56B4Q8NH76 319 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 DYRK2Q92630 601 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 MEGF10Q96KG7 1140 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 OR2V2Q96R30 315 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 MARVELD1Q9BSK0 173 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 SPACA1Q9HBV2 294 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 NUDT15Q9NV35 164 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 ANAPC10Q9UM13 185 aa10.6□□□□□ -0.71
SRSF1-204ENST00000581979 DISC1C4P0D8 188 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 H7C1Q1 480 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 OVOL3O00110 214 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 NOS1APO75052 506 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 AMY2AP04746 511 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 CSN2P05814 226 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 HEXAP06865 529 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 ACAA1P09110 424 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 DANCRP0C864 163 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 NAT1P18440 290 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 AMY2BP19961 511 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 TNFSF4P23510 183 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 RAB25P57735 213 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 CLEC9AQ6UXN8 241 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 WDR82Q6UXN9 313 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 CADM3Q8N126 398 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 BPIFB2Q8N4F0 458 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 BEST4Q8NFU0 473 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 OR4K15Q8NH41 348 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 HDHD3Q9BSH5 251 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
SRSF1-204ENST00000581979 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
SRSF1-204ENST00000581979 ZANQ9Y493 2812 aa10.58□□□□□ -0.71
SRSF1-204ENST00000581979 MCRIP1C9JLW8 97 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 E7EQL1 145 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 DEGS1O15121 323 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 DHFRP00374 187 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 IGHV1-46P01743 117 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 PMP2P02689 132 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 ZNF44P15621 663 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 TBPP20226 339 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 GLRA1P23415 457 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 HRH1P35367 487 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 PMELP40967 661 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 TNFAIP6P98066 277 aaPredicted RBP10.58□□□□□ -0.72
SRSF1-204ENST00000581979 CARTPTQ16568 116 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 ITLN1Q8WWA0 313 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 MAFIPQ8WZ33 124 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SNAPC3Q92966 411 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 C20orf85Q9H1P6 137 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 FN3KRPQ9HA64 309 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
SRSF1-204ENST00000581979 RCC2Q9P258 522 aaKnown RBP10.58□□□□□ -0.72
SRSF1-204ENST00000581979 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 HSPB6O14558 160 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 NDUFB6O95139 128 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 PTBP3O95758 552 aaKnown RBP10.58□□□□□ -0.72
SRSF1-204ENST00000581979 LY6G6DO95868 133 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms