RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	CREB3L1	Q96BA8	519 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	SPACA5	Q96QH8	159 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	CHST6	Q9GZX3	395 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	TMEM133	Q9H2Q1	129 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	DCLRE1B	Q9H816	532 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	IL36G	Q9NZH8	169 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	OR6C3	Q9NZP0	311 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	CKLF	Q9UBR5	152 aa		10.21	□□□□□ -0.77
CDK5RAP3-222	ENST00000581708	TRBV5-5	A0A0J9YX44	114 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		H0YJX3	145 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		M0QZ24	198 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SIRPB1	O00241	398 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DEGS1	O15121	323 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF780A	O75290	641 aa	Predicted RBP	10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CLIC3	O95833	236 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ARG1	P05089	322 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PTGFR	P43088	359 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GTF2A1	P52655	376 aa	Predicted RBP	10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ST3GAL4	Q11206	333 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR2G6	Q5TZ20	316 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ASPHD2	Q6ICH7	369 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		Q6P435	159 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TRAPPC6B	Q86SZ2	158 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LINC00596	Q86U02	117 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CDH26	Q8IXH8	852 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF485	Q8NCK3	441 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR4C13	Q8NGP0	309 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF596	Q8TC21	504 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PIFO	Q8TCI5	191 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TNFAIP8L1	Q8WVP5	186 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	C17orf50	Q8WW18	174 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TAF15	Q92804	592 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GGH	Q92820	318 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GHSR	Q92847	366 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GPER1	Q99527	375 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CLEC7A	Q9BXN2	247 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	NPFFR1	Q9GZQ6	430 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PPA2	Q9H2U2	334 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	IFT22	Q9H7X7	185 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ABCB10	Q9NRK6	738 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PSORS1C1	Q9UIG5	152 aa		10.2	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	IGHV2-26	A0A0B4J1V2	119 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ODAM	A1E959	279 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SLC33A1	O00400	549 aa	Predicted RBP	10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GABRP	O00591	440 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CD34	P28906	385 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	BDKRB2	P30411	391 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GABRA5	P31644	462 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SOX2	P48431	317 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	BDH1	Q02338	343 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GPR176	Q14439	515 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RSU1	Q15404	277 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		Q499Y3	187 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RNLS	Q5VYX0	342 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	XAF1	Q6GPH4	301 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SLC35E4	Q6ICL7	350 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TREML4	Q6UXN2	200 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF565	Q8N9K5	539 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TFAP2C	Q92754	450 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	BARHL1	Q9BZE3	327 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TAS2R4	Q9NYW5	299 aa		10.19	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		A0A087X0M5	115 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		A0A1B0GX30	115 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF729	A6NN14	1252 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	IGFBP3	P17936	291 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FST	P19883	344 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	HTR1D	P28221	377 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF93	P35789	620 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ARHGDIB	P52566	201 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SNU13	P55769	128 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	AES	Q08117	197 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DYNC1I2	Q13409	638 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RIPK1	Q13546	671 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	KRBOX4	Q5JUW0	171 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SLC16A12	Q6ZSM3	486 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RNF144B	Q7Z419	303 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LHFPL4	Q7Z7J7	247 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SATL1	Q86VE3	508 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TPRX1	Q8N7U7	411 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR4D6	Q8NGJ1	314 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR51A2	Q8NGJ7	313 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR2T6	Q8NHC8	308 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MRPS24	Q96EL2	167 aa	Known RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	S100A13	Q99584	98 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	METTL9	Q9H1A3	318 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LINC00574	Q9H8X3	128 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CLEC2D	Q9UHP7	191 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TCF19	Q9Y242	345 aa		10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.18	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OOSP1	A8MZH6	123 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MYL12B	O14950	172 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GNAO1	P09471	354 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CALCB	P10092	127 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CDK2	P24941	298 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MAPK3	P27361	379 aa	Predicted RBP	10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	C21orf33	P30042	268 aa	Predicted RBP	10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CEACAM3	P40198	252 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GLIPR1	P48060	266 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	WNT4	P56705	351 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms