RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 C16orf87Q6PH81 154 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF767PQ75MW2 155 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 FAM19A1Q7Z5A9 133 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 FAM184AQ8NB25 1140 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 OR2M3Q8NG83 312 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 OR5T3Q8NGG3 340 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 GPR119Q8TDV5 335 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 ADTRPQ96IZ2 230 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 QKIQ96PU8 341 aaKnown RBP eCLIP0.79□□□□□ -2.283e-7■■■□□ 16.5
SMCHD1-206ENST00000581631 LINC01587Q99440 93 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 TSNAXQ99598 290 aaKnown RBP0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 TSGA10Q9BZW7 698 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 C12orf4Q9NQ89 552 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC7A11Q9UPY5 501 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 KIF27Q86VH2 1401 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 ADAMTS7Q9UKP4 1686 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 NUP205Q92621 2012 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 TRBV24-1A0A075B6N3 115 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A1B0GTI1 187 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A1W2PPV4 95 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC5A10A0PJK1 596 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 IGKV2-29A2NJV5 120 aaPredicted RBP0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 KNCNA6PVL3 124 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 H0YC42 278 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 KLRC4-KLRK1H3BQV0 150 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 TP53I11O14683 189 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 KDELR3O43731 214 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 ENSAO43768 121 aaKnown RBP0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 ALOX12BO75342 701 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 PDYNP01213 254 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 MBP02144 154 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 PSMB9P28065 219 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 GPR176Q14439 515 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 HES1Q14469 280 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 WDR43Q15061 677 aaKnown RBP eCLIP0.78□□□□□ -2.284e-6■□□□□ 9.3
SMCHD1-206ENST00000581631 ATP6AP1LQ52LC2 224 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC25A25Q6KCM7 469 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 ERICH5Q6P6B1 374 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 TPGS1Q6ZTW0 290 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 SCXQ7RTU7 201 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 GALNT10Q86SR1 603 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 LINC00523Q86TU6 105 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 NELFCDQ8IXH7 590 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 OR52K1Q8NGK4 314 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 OR6K6Q8NGW6 343 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 CLHC1Q8NHS4 586 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 OR2M4Q96R27 311 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 MAP1LC3CQ9BXW4 147 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 IL22Q9GZX6 179 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 AICDAQ9GZX7 198 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 OR2D2Q9H210 308 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 CHRAC1Q9NRG0 131 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 CYB5R1Q9UHQ9 305 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 ANXA10Q9UJ72 324 aa0.78□□□□□ -2.28
SMCHD1-206ENST00000581631 MIA3Q5JRA6 1907 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ICE1Q9Y2F5 2266 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ANKRD20A5PA0PJZ0 165 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ERICH4A6NGS2 130 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 OR2AT4A6NND4 320 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 H3BP45 60 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 POP7O75817 140 aaKnown RBP0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 SC5DO75845 299 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 RAB36O95755 333 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 SOD3P08294 240 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 OR12D1P0DN82 309 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 PRKACAP17612 351 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 MSR1P21757 451 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 CASP8Q14790 479 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 STK38Q15208 465 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 GUSBP1Q15486 140 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 TOMM34Q15785 309 aaPredicted RBP0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 SPIN4Q56A73 249 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 HSP90AA4PQ58FG1 418 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 TMEM215Q68D42 235 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ELP2Q6IA86 826 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 LAIR2Q6ISS4 152 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 NIPAL1Q6NVV3 410 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ARHGAP18Q8N392 663 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 CIDECQ96AQ7 238 aaPredicted RBP0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ZNF396Q96N95 335 aaPredicted RBP0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 B9D2Q9BPU9 175 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 ULBP1Q9BZM6 244 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 TDRD3Q9H7E2 651 aaKnown RBP0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 SDHAF3Q9NRP4 125 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 STMN3Q9NZ72 180 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 FLVCR2Q9UPI3 526 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 V9GYY9 64 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 SYNRGQ9UMZ2 1314 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 MYO9BQ13459 2157 aa0.77□□□□□ -2.29
SMCHD1-206ENST00000581631 AQRO60306 1485 aaKnown RBP eCLIP0.76□□□□□ -2.291e-9■■■■■ 66.7
SMCHD1-206ENST00000581631 SEC14L6B5MCN3 397 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 H3BRN7 92 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 H7C2Y5 167 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 SPOPO43791 374 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 SH2D1AO60880 128 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 ZNF189O75820 626 aaPredicted RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 GPR75O95800 540 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 CD8AP01732 235 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 CRYGCP07315 174 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 SCGB1C2P0DMR2 95 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms