RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CTSGP08311 255 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 TPM1P09493 284 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 CGB3P0DN86 165 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 CGB7P0DN87 165 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 HTR2BP41595 481 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 MAGEA3P43357 314 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 DNASE1L1P49184 302 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 OR10A3P58181 314 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 TNNC1P63316 161 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 SSX1Q16384 188 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 CLEC12AQ5QGZ9 265 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 Q6ZQT7 251 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 OR51Q1Q8NH59 317 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 SLC25A44Q96H78 314 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 BIRC8Q96P09 236 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2M4Q96R27 311 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 VAT1Q99536 393 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 KLF6Q99612 283 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 ENPP5Q9UJA9 477 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 RAB19A4D1S5 217 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 LEUTXA8MZ59 168 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 ZNF879B4DU55 563 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 F8VP50 259 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 PLPP3O14495 311 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 CDS2O95674 445 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 MLNP12872 115 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 CBR1P16152 277 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 IMPA1P29218 277 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 LGALS7P47929 136 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 GCLMP48507 274 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 RAB38P57729 211 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 BAXQ07812 192 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 STX4Q12846 297 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 STX3Q13277 289 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 GPR176Q14439 515 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 TTMPQ5BVD1 217 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 IDNKQ5T6J7 187 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 GLYATQ6IB77 296 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 BPIFB6Q8NFQ5 453 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 DOK4Q8TEW6 326 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 BLNKQ8WV28 456 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 CIB1Q99828 191 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 COPS4Q9BT78 406 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 HIGD2AQ9BW72 106 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 ZNF436Q9C0F3 470 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 TXNIPQ9H3M7 391 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 MFSD1Q9H3U5 465 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 VCX3AQ9NNX9 186 aa1.77□□□□□ -2.13
SMCHD1-204ENST00000581226 IGHV3-21A0A0B4J1V1 117 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 A0A1W2PNM2 257 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 J3QKU1 62 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TCAPO15273 167 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 IGKV1D-33P01593 117 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 IGKV1-33P01594 117 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 GP1BAP07359 652 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TSPOP30536 169 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 AQP5P55064 265 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 OR2B6P58173 313 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TMEM241Q24JQ0 296 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 ATP6AP1LQ52LC2 224 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 ZNF773Q6PK81 442 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 SPNS3Q6ZMD2 512 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 LINC00596Q86U02 117 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 ZFP82Q8N141 532 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 SPERTQ8NA61 448 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 DRAXINQ8NBI3 349 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 Q8NDZ9 215 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 OR2M3Q8NG83 312 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 C2orf15Q8WU43 125 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TMEM239Q8WW34 195 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 C22orf15Q8WYQ4 148 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TRIB3Q96RU7 358 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 TSGA10Q9BZW7 698 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 GABARAPL1Q9H0R8 117 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 RHOFQ9HBH0 211 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 NRBP2Q9NSY0 501 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 ZNF443Q9Y2A4 671 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 MYO15BQ96JP2 1530 aa1.76□□□□□ -2.13
SMCHD1-204ENST00000581226 LTBP2Q14767 1821 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 IGHV3-43A0A0B4J1X8 118 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 A8MWP4 228 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 SLC31A1O15431 190 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 COX7A2P2O60397 106 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 PSIP1O75475 530 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 MYO1DO94832 1006 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 APOA1P02647 267 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 GTF2H1P32780 548 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 RANBP1P43487 201 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 XKP51811 444 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 PLTPP55058 493 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 UBE2KP61086 200 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 ACTBL2Q562R1 376 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 AHSA2Q719I0 299 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 GALNT10Q86SR1 603 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 ZIC4Q8N9L1 334 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 MAL2Q969L2 176 aa1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 ZMYND19Q96E35 227 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-204ENST00000581226 TMBIM4Q9HC24 238 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms