RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RPEQ96AT9 228 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 FGGYQ96C11 551 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 MYCBPQ99417 103 aaPredicted RBP14.25□□□□□ -0.13
MKS1-209ENST00000580127 B9D2Q9BPU9 175 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 IL36RNQ9UBH0 155 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 POMPQ9Y244 141 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 MOB4Q9Y3A3 225 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 NUDT19A8MXV4 375 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 M0R129 80 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 DEGS1O15121 323 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 MITFO75030 526 aaPredicted RBP14.24□□□□□ -0.13
MKS1-209ENST00000580127 CSN2P05814 226 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 CALCBP10092 127 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 GLIPR1P48060 266 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 BNIP1Q12981 228 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 SAXO1Q8IYX7 474 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 LINC00482Q8N8I6 264 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 OR8J1Q8NGP2 316 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 OR9G1Q8NH87 305 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 HRASLS5Q96KN8 279 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 OPALINQ96PE5 141 aa14.24□□□□□ -0.13
MKS1-209ENST00000580127 ISG15P05161 165 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 NFYBP25208 207 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 C21orf33P30042 268 aaPredicted RBP14.23□□□□□ -0.13
MKS1-209ENST00000580127 HOXD3P31249 432 aaPredicted RBP14.23□□□□□ -0.13
MKS1-209ENST00000580127 MYCNOSP40205 109 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 KDM4DQ6B0I6 523 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 MRPL41Q8IXM3 137 aaKnown RBP14.23□□□□□ -0.13
MKS1-209ENST00000580127 RDH10Q8IZV5 341 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 PRSS35Q8N3Z0 413 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 TOMM40LQ969M1 308 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 ADAT3Q96EY9 351 aaPredicted RBP14.23□□□□□ -0.13
MKS1-209ENST00000580127 MRPL48Q96GC5 212 aaKnown RBP14.23□□□□□ -0.13
MKS1-209ENST00000580127 COMMD4Q9H0A8 199 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 ZNF286AQ9HBT8 521 aa14.23□□□□□ -0.13
MKS1-209ENST00000580127 A0A087X0M5 115 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 A0A1B0GX30 115 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 FAM172BPA6NC97 362 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 LY6LH3BQJ8 138 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 KDM4BO94953 1096 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 AMY1AP04745 511 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 AMY2AP04746 511 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 NHLRC4P0CG21 123 aaPredicted RBP14.22□□□□□ -0.13
MKS1-209ENST00000580127 DBTP11182 482 aaKnown RBP14.22□□□□□ -0.13
MKS1-209ENST00000580127 FASP25445 335 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 EPHA2P29317 976 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 RPL23AP62750 156 aaKnown RBP14.22□□□□□ -0.13
MKS1-209ENST00000580127 HES1Q14469 280 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 ATP6AP1Q15904 470 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 C11orf87Q6NUJ2 197 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 OR2G2Q8NGZ5 317 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 HAVCR2Q8TDQ0 301 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 BARHL1Q9BZE3 327 aa14.22□□□□□ -0.13
MKS1-209ENST00000580127 TENM3Q9P273 2699 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 IGKV1-9A0A0C4DH69 117 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 KBTBD11-OT1A0A1B0GTJ5 212 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 SERPINE3A8MV23 424 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 RAMP3O60896 148 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 MT-ND2P03891 347 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 TMEM225BP0DP42 221 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 VSIG8P0DPA2 414 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 THBS3P49746 956 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 DGCR2P98153 550 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 MADCAM1Q13477 382 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 TP53I3Q53FA7 332 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 ZNF329Q86UD4 541 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 FOXRED2Q8IWF2 684 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 OR5D14Q8NGL3 314 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 OR13C3Q8NGS6 347 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 CPNE2Q96FN4 548 aaPredicted RBP14.21□□□□□ -0.13
MKS1-209ENST00000580127 GON7Q9BXV9 100 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 ING3Q9NXR8 418 aa14.21□□□□□ -0.13
MKS1-209ENST00000580127 DAPL1A0PJW8 107 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 SH2D7A6NKC9 451 aaPredicted RBP14.2□□□□□ -0.14
MKS1-209ENST00000580127 APOL3O95236 402 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 HTR1AP08908 422 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 TMEM11P17152 192 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 KIR3DL2P43630 455 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 RAB7AP51149 207 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 CCR9P51686 369 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 FDX2Q6P4F2 183 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 C10orf99Q6UWK7 81 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 BAIAP2L2Q6UXY1 529 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 SLC16A12Q6ZSM3 486 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 TRUB1Q8WWH5 349 aaKnown RBP14.2□□□□□ -0.14
MKS1-209ENST00000580127 RFT1Q96AA3 541 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 NCOR1P1Q9H4R4 102 aa14.2□□□□□ -0.14
MKS1-209ENST00000580127 COL7A1Q02388 2944 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A18PA6NE21 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A16PA6NEW6 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A20PA6NIJ5 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 SNTNA6NMZ2 147 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A12PA8MX19 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A5PA8MXJ8 464 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 J3QR06 171 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 FGF16O43320 207 aa14.19□□□□□ -0.14
MKS1-209ENST00000580127 SNRNP70P08621 437 aaKnown RBP14.19□□□□□ -0.14
MKS1-209ENST00000580127 FAM90A15PP0C7V4 464 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms