RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 OR10K1Q8NGX5 313 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 CCDC90BQ9GZT6 254 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 METTL9Q9H1A3 318 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 Q9H521 79 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 SF3B6Q9Y3B4 125 aaKnown RBP11.81□□□□□ -0.52
MKS1-207ENST00000578789 TMEM89A2RUT3 159 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 FUOMA2VDF0 154 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 DEGS1O15121 323 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
MKS1-207ENST00000578789 ZNF780AO75290 641 aaPredicted RBP11.8□□□□□ -0.52
MKS1-207ENST00000578789 CDRT1O95170 752 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 GP2P55259 537 aaKnown RBP11.8□□□□□ -0.52
MKS1-207ENST00000578789 ACTG1P63261 375 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 INSL4Q14641 139 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 MIDNQ504T8 468 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 ACSM3Q53FZ2 586 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 LIPKQ5VXJ0 399 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 PNKDQ8N490 385 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 SLC25A28Q96A46 364 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 DUX5Q96PT3 197 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 TMED9Q9BVK6 235 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 PPA2Q9H2U2 334 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 ZNRD1Q9P1U0 126 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 ING4Q9UNL4 249 aa11.8□□□□□ -0.52
MKS1-207ENST00000578789 TRAV24A0A0B4J272 114 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
MKS1-207ENST00000578789 HTR3BO95264 441 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 MAS1P04201 325 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 FBP1P09467 338 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 CPEP16870 476 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 SAA4P35542 130 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 MAP2K4P45985 399 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 COMPP49747 757 aaPredicted RBP11.79□□□□□ -0.52
MKS1-207ENST00000578789 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
MKS1-207ENST00000578789 PAX5Q02548 391 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 TRAM1Q15629 374 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 PIGYQ3MUY2 71 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 ZNF367Q7RTV3 350 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 LINC00596Q86U02 117 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 JAGN1Q8N5M9 183 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 PHYHIPQ92561 330 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 CORO2AQ92828 525 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 MUL1Q969V5 352 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 COQ2Q96H96 371 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 S100A13Q99584 98 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 UQCC2Q9BRT2 126 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
MKS1-207ENST00000578789 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
MKS1-207ENST00000578789 POMT1Q9Y6A1 747 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PRD5 423 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PRF3 423 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PRM7 423 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 MEGF11A6BM72 1044 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 CSTBP04080 98 aaKnown RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 UCHL1P09936 223 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 HSMCR30P0CW71 290 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 IGHV1-8P0DP01 117 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 SERPINA2P20848 420 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 PSMA1P25786 263 aaKnown RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 KCNJ3P48549 501 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 RPS25P62851 125 aaKnown RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 SCN1BQ07699 218 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 GPR176Q14439 515 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 ZNF782Q6ZMW2 699 aaPredicted RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 NR1H4Q96RI1 486 aaPredicted RBP11.78□□□□□ -0.52
MKS1-207ENST00000578789 MGLLQ99685 303 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 NCOR1P1Q9H4R4 102 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 ACOT13Q9NPJ3 140 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 TAS2R3Q9NYW6 316 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
MKS1-207ENST00000578789 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 A0A1W2PP11 408 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 ODAMA1E959 279 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
MKS1-207ENST00000578789 MEIOCA2RUB1 952 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 ODF3BA8MYP8 253 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 CLPXO76031 633 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 HKR1P10072 659 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 GTF2F2P13984 249 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 IER3P46695 156 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 GLIPR1P48060 266 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 AESQ08117 197 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.53
MKS1-207ENST00000578789 SLC22A6Q4U2R8 563 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 HSD17B12Q53GQ0 312 aa11.77□□□□□ -0.53
MKS1-207ENST00000578789 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms