RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PPP1R35Q8TAP8 253 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 S100PBPQ96BU1 408 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 MOB3AQ96BX8 217 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ELMOD3Q96FG2 381 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 RTBDNQ9BSG5 229 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 HDHD3Q9BSH5 251 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 FGF23Q9GZV9 251 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 WDR13Q9H1Z4 485 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 SEBOXQ9HB31 216 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 KCNIP1Q9NZI2 227 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 LUZP4Q9P127 313 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 MAB21L2Q9Y586 359 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 EP300Q09472 2414 aaPredicted RBP9.47□□□□□ -0.89
SKA2-204ENST00000578519 C13orf42A0A1B0GVH6 325 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 A0A1B0GW55 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 TUBAL3A6NHL2 446 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 CRYM-AS1A6NIL9 109 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 A6NLC8 198 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 RP2O75695 350 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 OR2F2O95006 317 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 KNG1P01042 644 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L2P0CJ85 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L3P0CJ86 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L4P0CJ87 422 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L5P0CJ88 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L6P0CJ89 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4L7P0CJ90 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 GLRA1P23415 457 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 PTAFRP25105 342 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 MPV17P39210 176 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 H2BFSP57053 126 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 KLF3P57682 345 aaPredicted RBP9.47□□□□□ -0.89
SKA2-204ENST00000578519 ERVK11-1P61568 191 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 SNRPD2P62316 118 aaKnown RBP9.47□□□□□ -0.89
SKA2-204ENST00000578519 ZNF154Q13106 437 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 OR2F1Q13607 317 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 ZNF146Q15072 292 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 C11orf87Q6NUJ2 197 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 RND1Q92730 232 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 MRGPRFQ96AM1 343 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 NRIP2Q9BQI9 281 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DUX4Q9UBX2 424 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 UBQLN2Q9UHD9 624 aa9.47□□□□□ -0.89
SKA2-204ENST00000578519 DBX1A6NMT0 343 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 IFNL4K9M1U5 179 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 CDIPTO14735 213 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 HS3ST1O14792 307 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 IGHV3-13P01766 116 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 ZNF250P15622 560 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 BMP5P22003 454 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 PSMB6P28072 239 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 SERPINF1P36955 418 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 CD200P41217 278 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 ERVS71-1P61550 626 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 SORDQ00796 357 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 KLRB1Q12918 225 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 PDCD1Q15116 288 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 SLC9A3R2Q15599 337 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 SMIM21Q3B7S5 101 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 ZNF660Q6AZW8 331 aaPredicted RBP9.46□□□□□ -0.9
SKA2-204ENST00000578519 TRAT1Q6PIZ9 186 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TEX261Q6UWH6 196 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 RTN4RL2Q86UN3 420 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 MYPOPQ86VE0 399 aaPredicted RBP9.46□□□□□ -0.9
SKA2-204ENST00000578519 CMTM1Q8IZ96 169 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 LGI3Q8N145 548 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 OR10J5Q8NHC4 309 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 PRR7Q8TB68 274 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TOMM40LQ969M1 308 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 SNRNP40Q96DI7 357 aaKnown RBP9.46□□□□□ -0.9
SKA2-204ENST00000578519 GALNT14Q96FL9 552 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 KIRREL1Q96J84 757 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 DIRC2Q96SL1 478 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 VKORC1Q9BQB6 163 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 RSRP1Q9BUV0 290 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TLNRD1Q9H1K6 362 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 NAA60Q9H7X0 242 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 RAB9BQ9NP90 201 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 CRIM1Q9NZV1 1036 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TINAGQ9UJW2 476 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 TRAPPC2LQ9UL33 140 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 U3KQ87 197 aa9.46□□□□□ -0.9
SKA2-204ENST00000578519 IGKV1D-8A0A087WSZ0 117 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 A0A1B0GWJ7 208 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 KANTRA0A1W2PQU2 76 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 TMEM30CPA0ZSE6 113 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 FAM221AA4D161 298 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 GPR31O00270 319 aa9.45□□□□□ -0.9
SKA2-204ENST00000578519 ARPC5O15511 151 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms