RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 C15orf40Q8WUR7 153 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 EMG1Q92979 244 aaKnown RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 DIRAS2Q96HU8 199 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 DNTTIP1Q9H147 329 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 WDR13Q9H1Z4 485 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 LIME1Q9H400 295 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 CHODLQ9H9P2 273 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 BARX1Q9HBU1 254 aaPredicted RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.7□□□□□ -1.34
COPS3-215ENST00000578317 RCC2Q9P258 522 aaKnown RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 GLS2Q9UI32 602 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 HSF4Q9ULV5 492 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PPIAL4AQ9Y536 164 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 CACNG2Q9Y698 323 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 A0A0A6YYD4 124 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 FABP12A6NFH5 140 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 OOEPA6NGQ2 149 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 OR2AT4A6NND4 320 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 SH2D1BO14796 132 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 GEMIN2O14893 280 aaKnown RBP6.69□□□□□ -1.34
COPS3-215ENST00000578317 WNT9BO14905 357 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 CA11O75493 328 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 CYB5R3P00387 301 aaPredicted RBP6.69□□□□□ -1.34
COPS3-215ENST00000578317 HLA-DQB1P01920 261 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 INHBBP09529 407 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 PSG2P11465 335 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 EGR1P18146 543 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 FUT3P21217 361 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 PRDX2P32119 198 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 CDKN1AP38936 164 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 VEGFCP49767 419 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 KRTAP10-9P60411 292 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 IL13RA1P78552 427 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 ZNF45Q02386 682 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 KCNJ8Q15842 424 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 PIGYQ3MUY2 71 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 SPANXN2Q5MJ10 180 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 SIGIRRQ6IA17 410 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 Q6P435 159 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 CNIH2Q6PI25 160 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 BAIAP2L2Q6UXY1 529 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 Q6ZTK2 550 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 TGIF2LYQ8IUE0 185 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 CHST4Q8NCG5 386 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 OR10R2Q8NGX6 335 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 ANGPTL6Q8NI99 470 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 S100ZQ8WXG8 99 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 YIPF5Q969M3 257 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 PHF21AQ96BD5 680 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 SDSLQ96GA7 329 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 ATG5Q9H1Y0 275 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 KCNK15Q9H427 330 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 TMEM165Q9HC07 324 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 NLKQ9UBE8 527 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 ZNF222Q9UK12 451 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 WIPI2Q9Y4P8 454 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 ARFGEF3Q5TH69 2177 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 AKAP6Q13023 2319 aa6.69□□□□□ -1.34
COPS3-215ENST00000578317 RFPL4AA6NLU0 287 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FAM25AB3EWG3 89 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FAM25CB3EWG5 89 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FAM25GB3EWG6 89 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CLDN25C9JDP6 229 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 RFPL4AL1F8VTS6 287 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 DEGS1O15121 323 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CTDSPLO15194 276 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 SOCS1O15524 211 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 NDUFS7O75251 213 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PDCD6O75340 191 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 OR7C1O76099 320 aaPredicted RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 CDK2P24941 298 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 GIFP27352 417 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CHATP28329 748 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 BLVRBP30043 206 aaPredicted RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 PTH2RP49190 550 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PITPNAQ00169 270 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PAX5Q02548 391 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 MOGAT2Q3SYC2 334 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 ZNF260Q3ZCT1 412 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 SHEQ5VZ18 495 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 STUMQ69YW2 141 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PYHIN1Q6K0P9 492 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 ZNF788Q6ZQV5 615 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 DNM1P46Q6ZS02 220 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PEG10Q86TG7 708 aaKnown RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 LRRC75A-AS1Q8N1F1 130 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 OR4M1Q8NGD0 313 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 RAB1CQ92928 201 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 RAB3CQ96E17 227 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 KIRREL1Q96J84 757 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 NICN1Q9BSH3 213 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 AKIP1Q9NQ31 210 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 DCAF16Q9NXF7 216 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 TREM2Q9NZC2 230 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 KAAG1Q9UBP8 84 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 EXTL2Q9UBQ6 330 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FLNBO75369 2602 aaKnown RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms