RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 J3QLW9 94 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 ZFPL1O95159 310 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 CGB3P0DN86 165 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 CGB7P0DN87 165 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 ZNF19P17023 458 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 DYNC1I2Q13409 638 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 IL13RA2Q14627 380 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 KPNB1Q14974 876 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 OR51A4Q8NGJ6 313 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 OR13C9Q8NGT0 318 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 OR5AK2Q8NH90 309 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 CHST6Q9GZX3 395 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 IFT22Q9H7X7 185 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 FOXJ3Q9UPW0 622 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 GSTK1Q9Y2Q3 226 aa11.64□□□□□ -0.55
SMARCE1-213ENST00000578044 LOC100130705A0A1B0GUX0 176 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 PTGFRP43088 359 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 OR10AC1Q8NH08 325 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 NDNFQ8TB73 568 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 OCSTAMPQ9BR26 566 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 FGF20Q9NP95 211 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 IL36GQ9NZH8 169 aa11.63□□□□□ -0.55
SMARCE1-213ENST00000578044 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 IRGMA1A4Y4 181 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 H3BSH0 61 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 OR2F2O95006 317 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 CD2P06729 351 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 CDK2P24941 298 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 PAX6P26367 422 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 DCKP27707 260 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 DUSP1P28562 367 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 RAB13P51153 203 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 PRRX1P54821 245 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 CD83Q01151 205 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 SLC34A1Q06495 639 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 ZNF691Q5VV52 312 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 CCDC121Q6ZUS5 278 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 LHFPL3Q86UP9 236 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 PQLC1Q8N2U9 271 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 COQ2Q96H96 371 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 C8orf4Q9NR00 106 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM118AQ9NWS6 357 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 DHDHQ9UQ10 334 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
SMARCE1-213ENST00000578044 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 SIRPB1O00241 398 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 DEGS1O15121 323 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 MAGEB3O15480 346 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 MMP23AO75900 390 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 TMEM225BP0DP42 221 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 ZNF44P15621 663 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 RAB3AP20336 220 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 GLIPR1P48060 266 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 AESQ08117 197 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 LINC00596Q86U02 117 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 TMEM219Q86XT9 240 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 OR52I1Q8NGK6 324 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 RBM14Q96PK6 669 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 NKX3-1Q99801 234 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 BARHL1Q9BZE3 327 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 S100A14Q9HCY8 104 aa11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 PAK1IP1Q9NWT1 392 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A18PA6NE21 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A16PA6NEW6 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A20PA6NIJ5 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A9PA6NNJ1 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A12PA8MX19 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A5PA8MXJ8 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 PEX14O75381 377 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 GPX5O75715 221 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 HCKP08631 526 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A15PP0C7V4 464 aa11.6□□□□□ -0.55
SMARCE1-213ENST00000578044 FAM90A13PP0C7W8 464 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms