RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 AESQ08117 197 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 BNIP1Q12981 228 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 MADCAM1Q13477 382 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 SLC35F2Q8IXU6 374 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 CHST4Q8NCG5 386 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 TVP23BQ9NYZ1 205 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 H2AFY2Q9P0M6 372 aaPredicted RBP10.51□□□□□ -0.73
COPS3-214ENST00000577246 LINC00527Q9UJ94 153 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 RYR2Q92736 4967 aa10.51□□□□□ -0.73
COPS3-214ENST00000577246 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 OR2H2O95918 312 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 RPLP1P05386 114 aaKnown RBP10.5□□□□□ -0.73
COPS3-214ENST00000577246 ELANEP08246 267 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 PRKACBP22694 351 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 NFYBP25208 207 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 GLIPR1P48060 266 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 NPBWR2P48146 333 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 SNU13P55769 128 aaKnown RBP10.5□□□□□ -0.73
COPS3-214ENST00000577246 MTCP1P56278 107 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 FOXE3Q13461 319 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 ODF4Q2M2E3 257 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 ZNF260Q3ZCT1 412 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 PLEKHG7Q6ZR37 379 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 HAVCR2Q8TDQ0 301 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 DNAJC9Q8WXX5 260 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 LRGUKQ96M69 825 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 RHOFQ9HBH0 211 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 HMG20AQ9NP66 347 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 CLN6Q9NWW5 311 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 CHCHD3Q9NX63 227 aaKnown RBP10.5□□□□□ -0.73
COPS3-214ENST00000577246 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 GSTK1Q9Y2Q3 226 aa10.5□□□□□ -0.73
COPS3-214ENST00000577246 KBTBD11-OT1A0A1B0GTJ5 212 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 J3QR06 171 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 CCRL2O00421 344 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 RPP14O95059 124 aaKnown RBP10.49□□□□□ -0.73
COPS3-214ENST00000577246 IGKV1D-33P01593 117 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 IGKV1-33P01594 117 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 OCM2P0CE71 109 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 OCMP0CE72 109 aaPredicted RBP10.49□□□□□ -0.73
COPS3-214ENST00000577246 ZNF44P15621 663 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 GDNFP39905 211 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 GPR50Q13585 617 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 TRIM25Q14258 630 aaKnown RBP10.49□□□□□ -0.73
COPS3-214ENST00000577246 HNF4GQ14541 408 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 DEFB136Q30KP8 78 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 FAM27D1Q5T7N8 215 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 TMEM236Q5W0B7 351 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 LHFPL2Q6ZUX7 228 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 MEPCEQ7L2J0 689 aaKnown RBP10.49□□□□□ -0.73
COPS3-214ENST00000577246 TGIF2LXQ8IUE1 241 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 YIPF7Q8N8F6 280 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 RNF152Q8N8N0 203 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 ZNF565Q8N9K5 539 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 C4orf3Q8WVX3 66 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 COMMD4Q9H0A8 199 aa10.49□□□□□ -0.73
COPS3-214ENST00000577246 MRM2Q9UI43 246 aaKnown RBP10.49□□□□□ -0.73
COPS3-214ENST00000577246 A0A1W2PPI3 338 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 NCBP2LA6PVI3 153 aaKnown RBP10.48□□□□□ -0.73
COPS3-214ENST00000577246 UBCP0CG48 685 aaKnown RBP10.48□□□□□ -0.73
COPS3-214ENST00000577246 GPR12P47775 334 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 PDZK1IP1Q13113 114 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 CATSPERDQ86XM0 798 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 OR10X1Q8NGY0 326 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 KIRREL1Q96J84 757 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 FAM107BQ9H098 131 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 ABCG5Q9H222 651 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 ADGRL4Q9HBW9 690 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 LIN7CQ9NUP9 197 aaKnown RBP10.48□□□□□ -0.73
COPS3-214ENST00000577246 BIRC6Q9NR09 4857 aa10.48□□□□□ -0.73
COPS3-214ENST00000577246 EPPK1P58107 5090 aaKnown RBP10.47□□□□□ -0.73
COPS3-214ENST00000577246 DSCAML1Q8TD84 2053 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 MAGEB4O15481 346 aaPredicted RBP10.47□□□□□ -0.73
COPS3-214ENST00000577246 MPZL2O60487 215 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 SNX3O60493 162 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 CALCBP10092 127 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 VDAC1P21796 283 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 C21orf33P30042 268 aaPredicted RBP10.47□□□□□ -0.73
COPS3-214ENST00000577246 SCN1BQ07699 218 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 FHL3Q13643 280 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 C17orf58Q2M2W7 97 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 NXNL2Q5VZ03 156 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 SLC16A12Q6ZSM3 486 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 UTS2BQ765I0 119 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 GID4Q8IVV7 300 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 CITED4Q96RK1 184 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 NEK6Q9HC98 313 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 ARL8BQ9NVJ2 186 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 ING3Q9NXR8 418 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
COPS3-214ENST00000577246 LOC107986453A0A1B0GWG9 222 aa10.46□□□□□ -0.73
COPS3-214ENST00000577246 METTL15A6NJ78 407 aa10.46□□□□□ -0.73
COPS3-214ENST00000577246 H3BSH0 61 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms