RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SYT7O43581 403 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 ENTPD6O75354 484 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 OR8U8P0C7N1 319 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 FRMD6-AS1P0C7T7 363 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 OCM2P0CE71 109 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 OCMP0CE72 109 aaPredicted RBP9.36□□□□□ -0.91
CTNS-208ENST00000574218 ZNF44P15621 663 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 BCL3P20749 454 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 VDAC1P21796 283 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 GDNFP39905 211 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 GLIPR1P48060 266 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 AESQ08117 197 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 GK3PQ14409 553 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 ZNF146Q15072 292 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 ODF4Q2M2E3 257 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 FAM98BQ52LJ0 330 aaKnown RBP9.36□□□□□ -0.91
CTNS-208ENST00000574218 KRBOX4Q5JUW0 171 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 ZNF322Q6U7Q0 402 aaPredicted RBP9.36□□□□□ -0.91
CTNS-208ENST00000574218 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 ZNF429Q86V71 674 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 C4orf3Q8WVX3 66 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 CNN2Q99439 309 aaKnown RBP9.36□□□□□ -0.91
CTNS-208ENST00000574218 APOL4Q9BPW4 351 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 NDE1Q9NXR1 346 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 GSTK1Q9Y2Q3 226 aa9.36□□□□□ -0.91
CTNS-208ENST00000574218 IGKV1-27A0A075B6S5 117 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 A0A087X0M5 115 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 A0A1B0GX30 115 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 ZNF670-ZNF695F2Z2N8 137 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 OR2H2O95918 312 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 CALCBP10092 127 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 SLC2A5P22732 501 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 GPR12P47775 334 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 NPBWR2P48146 333 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 RBP2P50120 134 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 CXCR4P61073 352 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 SCN1BQ07699 218 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 UBE2V2Q15819 145 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 SPATS1Q496A3 300 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 C16orf89Q6UX73 402 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 CCDC54Q8NEL0 328 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 OR11H1Q8NG94 326 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 HAVCR2Q8TDQ0 301 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 MNTQ99583 582 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 CHST5Q9GZS9 411 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 CHCHD3Q9NX63 227 aaKnown RBP9.35□□□□□ -0.91
CTNS-208ENST00000574218 ACTR3BQ9P1U1 418 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 COPS3Q9UNS2 423 aa9.35□□□□□ -0.91
CTNS-208ENST00000574218 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 A0A1W2PPI3 338 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 J3QR06 171 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 GNGT2O14610 69 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 MPZL2O60487 215 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 RPP14O95059 124 aaKnown RBP9.34□□□□□ -0.91
CTNS-208ENST00000574218 OSMP13725 252 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 ATP6V1B2P21281 511 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 GLP1RP43220 463 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 PLEKHG7Q6ZR37 379 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 Q6ZSR3 168 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 MOB3BQ86TA1 216 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 TGIF2LXQ8IUE1 241 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 YIPF7Q8N8F6 280 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 RASL11BQ9BPW5 248 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 LIN7CQ9NUP9 197 aaKnown RBP9.34□□□□□ -0.91
CTNS-208ENST00000574218 TVP23BQ9NYZ1 205 aa9.34□□□□□ -0.91
CTNS-208ENST00000574218 H2AFY2Q9P0M6 372 aaPredicted RBP9.34□□□□□ -0.91
CTNS-208ENST00000574218 KBTBD11-OT1A0A1B0GTJ5 212 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 LDLRAD4O15165 306 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 SAP30O75446 220 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
CTNS-208ENST00000574218 CST1P01037 141 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 IGHV3-7P01780 117 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 KRT8P05787 483 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 OR5H8P0DN80 308 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 CCL1P22362 96 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 PRKACBP22694 351 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 C21orf33P30042 268 aaPredicted RBP9.33□□□□□ -0.92
CTNS-208ENST00000574218 GNG10P50151 68 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 MTCP1P56278 107 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 CDK5Q00535 292 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 GABPB1Q06547 395 aaPredicted RBP9.33□□□□□ -0.92
CTNS-208ENST00000574218 FHL3Q13643 280 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 ATXN7L3Q14CW9 347 aaPredicted RBP9.33□□□□□ -0.92
CTNS-208ENST00000574218 LTC4SQ16873 150 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 TMEM65Q6PI78 240 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 SLC35F2Q8IXU6 374 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 DEFB107AQ8IZN7 70 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 ZNF565Q8N9K5 539 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 CHST4Q8NCG5 386 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 DNAAF1Q8NEP3 725 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 OR6Q1Q8NGQ2 317 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 OR1N2Q8NGR9 330 aa9.33□□□□□ -0.92
CTNS-208ENST00000574218 OR2T10Q8NGZ9 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms