RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 FXYD5Q96DB9 178 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OTUB2Q96DC9 234 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PHYHIPLQ96FC7 376 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PDXPQ96GD0 296 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 YPEL4Q96NS1 127 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR2A7Q96R45 310 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 LINC01587Q99440 93 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CDX2Q99626 313 aaPredicted RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 ANAPC13Q9BS18 74 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 TIPINQ9BVW5 301 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 EBPLQ9BY08 206 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 ULBP1Q9BZM6 244 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CHST5Q9GZS9 411 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR51B6Q9H340 312 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PLEKHF2Q9H8W4 249 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 RPS10P5Q9NQ39 176 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 C8orf17Q9NRJ1 99 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 RBM12B-AS1Q9P1G2 102 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 POMPQ9Y244 141 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 ALG5Q9Y673 324 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 NOS1P29475 1434 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 PTPRKQ15262 1439 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 IGLV3-10A0A075B6K4 115 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TRBV6-6A0A0A6YYG2 114 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 IGHV7-4-1A0A0J9YVY3 117 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TMEM72A0PK05 275 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TRIM49D1C9J1S8 452 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 M0QYV0 167 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 KCNK1O00180 336 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 LGALS9O00182 355 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 BPY2O14599 106 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 GYG2O15488 501 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLC37A4O43826 429 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 NSA2O95478 260 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 KRT75O95678 551 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 EPPINO95925 133 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 CYB5R3P00387 301 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 CGAP01215 116 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 HLA-DQA1P01909 254 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TNNC2P02585 160 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 MAS1P04201 325 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TCRBP04435 133 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 IFNA16P05015 189 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SOD3P08294 240 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SNRPAP09012 282 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 LINC00614P0C842 121 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SCGB1C2P0DMR2 95 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 HIST1H1EP10412 219 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 MYL12AP19105 171 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 PSMA1P25786 263 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 HSD11B1P28845 292 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 IMPA1P29218 277 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 RPL12P30050 165 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 AGTR1P30556 359 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLCO1A2P46721 670 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 OMPP47874 163 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 MNAT1P51948 309 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 WNT4P56705 351 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 C1QTNF8P60827 252 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 LSM6P62312 80 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 CCL7P80098 99 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 GTF2BQ00403 316 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 AESQ08117 197 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 LOXL1Q08397 574 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 C1DQ13901 141 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 TMED2Q15363 201 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ELOCQ15369 112 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 MPPED2Q15777 294 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 UBE2SQ16763 222 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TMEM176BQ3YBM2 270 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 AKIRIN2Q53H80 203 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TTMPQ5BVD1 217 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 RNASE13Q5GAN3 156 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 TEX30Q5JUR7 227 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF684Q5T5D7 378 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SYPL2Q5VXT5 272 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SAXO2Q658L1 398 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 GLYATQ6IB77 296 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF773Q6PK81 442 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SCGB1D4Q6XE38 83 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 NTM-AS1Q6ZSK4 140 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 RASSF6Q6ZTQ3 369 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 CLEC20AQ6ZU45 233 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 FA2HQ7L5A8 372 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 MTERF4Q7Z6M4 381 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLC51BQ86UW2 128 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 COMMD7Q86VX2 200 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 STX12Q86Y82 276 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 PDPNQ86YL7 162 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ITPRIPQ8IWB1 547 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 UBALD2Q8IYN6 164 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ORMDL3Q8N138 153 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLC25A45Q8N413 288 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ARIH2OSQ8N7S6 290 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLC25A29Q8N8R3 303 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 OR1M1Q8NGA1 313 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 OR4C13Q8NGP0 309 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 FAM57AQ8TBR7 257 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 SCGB1C1Q8TD33 95 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TWIST2Q8WVJ9 160 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms