RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 RAB23Q9ULC3 237 aa3.14□□□□□ -1.91
TOM1L1-216ENST00000573607 ATP6V1DQ9Y5K8 247 aa3.14□□□□□ -1.91
TOM1L1-216ENST00000573607 LAMB1P07942 1786 aa3.14□□□□□ -1.91
TOM1L1-216ENST00000573607 MED23Q9ULK4 1368 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 TIAM2Q8IVF5 1701 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 MYH8P13535 1937 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 KDM6AO15550 1401 aaPredicted RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 LRP5O75197 1615 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 PRMT5O14744 637 aaPredicted RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 RNF113AO15541 343 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 SEC11BP0C7V7 166 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 MPV17P39210 176 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 IDH2P48735 452 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 PSMB2P49721 201 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 RGS6P49758 472 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 MAPRE2Q15555 327 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 CDNFQ49AH0 187 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 CASP12Q6UXS9 341 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 MTERF4Q7Z6M4 381 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 DAZ4Q86SG3 579 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 CA13Q8N1Q1 262 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 PDCL2Q8N4E4 241 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 ATPAF2Q8N5M1 289 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 OR1P1Q8NH06 330 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 NT5CQ8TCD5 201 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 TNFRSF14Q92956 283 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 YIPF6Q96EC8 236 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 ADTRPQ96IZ2 230 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 SPACA5Q96QH8 159 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 PRRG3Q9BZD7 231 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 SLC38A1Q9H2H9 487 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 DAZ1Q9NQZ3 744 aaKnown RBP3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 C1orf167Q5SNV9 1468 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 KCPQ6ZWJ8 1503 aa3.13□□□□□ -1.91
TOM1L1-216ENST00000573607 MAST2Q6P0Q8 1798 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 NDUFS8O00217 210 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 TPM3P06753 285 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 HLA-GP17693 338 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 ARR3P36575 388 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 RPL10AP62906 217 aaKnown RBP3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 FAM131AQ6UXB0 335 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 TMEM136Q6ZRR5 245 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 LYPD1Q8N2G4 141 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 SYS1Q8N2H4 156 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 OR6N2Q8NGY6 317 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 SMIM8Q96KF7 97 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 METTL26Q96S19 204 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 SLC7A11Q9UPY5 501 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 RBMX2Q9Y388 322 aaKnown RBP3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 DOT1LQ8TEK3 1739 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 STRCQ7RTU9 1775 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 CPDO75976 1380 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 ABCC12Q96J65 1359 aa3.12□□□□□ -1.91
TOM1L1-216ENST00000573607 TNS3Q68CZ2 1445 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 ROBO1Q9Y6N7 1651 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 COL5A3P25940 1745 aaPredicted RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 COL14A1Q05707 1796 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SLC5A10A0PJK1 596 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 VAPBO95292 243 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 RNASE2P10153 161 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SYT1P21579 422 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SGPP2Q8IWX5 399 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 RNF10Q8N5U6 811 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 CCNYL1Q8N7R7 359 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SIKE1Q9BRV8 207 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 MRPL20Q9BYC9 149 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 FRMD8P1Q9BZ68 369 aaPredicted RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 UPF3BQ9BZI7 483 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SYT4Q9H2B2 425 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 IL37Q9NZH6 218 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 ZNF229Q9UJW7 825 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 KLF13Q9Y2Y9 288 aaPredicted RBP3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 CDK5RAP2Q96SN8 1893 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SHANK1Q9Y566 2161 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 MYH7BA7E2Y1 1941 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 SCN7AQ01118 1682 aa3.11□□□□□ -1.91
TOM1L1-216ENST00000573607 ZNF609O15014 1411 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 EP400Q96L91 3159 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 ZNF233A6NK53 670 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 GATCO43716 136 aaKnown RBP3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 CCDC172P0C7W6 258 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 MPIP34949 423 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 TGM4P49221 684 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 ATP5G2Q06055 141 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 IL15RAQ13261 267 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 LRRC8AQ8IWT6 810 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 NELFCDQ8IXH7 590 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 CYP4Z2PQ8N1L4 340 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 CIDECQ96AQ7 238 aaPredicted RBP3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 PDCD1LG2Q9BQ51 273 aa3.1□□□□□ -1.91
TOM1L1-216ENST00000573607 LLPHQ9BRT6 129 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms