RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TNFRSF19Q9NS68 423 aa6.39□□□□□ -1.39
SMG6-211ENST00000572369 MRPS28Q9Y2Q9 187 aaKnown RBP6.39□□□□□ -1.39
SMG6-211ENST00000572369 LSM2Q9Y333 95 aaKnown RBP6.39□□□□□ -1.39
SMG6-211ENST00000572369 TRGV10A0A0A0MS01 117 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 MDFIC2A0A1B0GVS7 189 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 TMEM82A0PJX8 343 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 MEIOCA2RUB1 952 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 RNASEK-C17orf49H0YIS7 233 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 PSPNO60542 156 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF780AO75290 641 aaPredicted RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF737O75373 536 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 VSIG8P0DPA2 414 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 GTF2F2P13984 249 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 CCL3L1P16619 93 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 PRTN3P24158 256 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 PSMA1P25786 263 aaKnown RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 DLX1P56177 255 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 LGALS4P56470 323 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ERVFRD-1P60508 538 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 GABARAPL2P60520 117 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 MEF2CQ06413 473 aaPredicted RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF273Q14593 569 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 INSL4Q14641 139 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 TBCEQ15813 527 aaPredicted RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 DEFB112Q30KQ8 113 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 PAN3Q58A45 887 aaKnown RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 ATAD3CQ5T2N8 411 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 GLT8D1Q68CQ7 371 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ELP2Q6IA86 826 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ASPHD2Q6ICH7 369 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 CRIP3Q6Q6R5 217 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 GLIPR1L1Q6UWM5 242 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 C17orf107Q6ZR85 190 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 C1orf122Q6ZSJ8 110 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 C9orf139Q6ZV77 190 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF367Q7RTV3 350 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 Q8N7P7 452 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 OR4S1Q8NGB4 309 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 NEK7Q8TDX7 302 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 ZNF696Q9H7X3 374 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 HEXA-AS1Q9H8Q6 139 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 SEBOXQ9HB31 216 aaPredicted RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 ISYNA1Q9NPH2 558 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 ST3GAL6Q9Y274 331 aa6.38□□□□□ -1.39
SMG6-211ENST00000572369 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
SMG6-211ENST00000572369 DSCAML1Q8TD84 2053 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 A0A0U1RQK1 487 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 MAGEA13PA6NCF6 341 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 BTBD17A6NE02 478 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 DNAJC9-AS1A6NH13 148 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 SLC33A1O00400 549 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 NPFFO15130 113 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 PIN1P1O15428 100 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 MRPS14O60783 128 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 CRTAPO75718 401 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 ARL6IP5O75915 188 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 OR7C1O76099 320 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 FBP1P09467 338 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 CPEP16870 476 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 SRMP19623 302 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 COX7A1P24310 79 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ERP29P30040 261 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 OR3A1P47881 315 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 UBE2E1P51965 193 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 P2RX3P56373 397 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 RBM11P57052 281 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 RPS25P62851 125 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 UBA52P62987 128 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 AESQ08117 197 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 DYNC1I2Q13409 638 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 TPBGQ13641 420 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 IL13RA2Q14627 380 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ATXN7L3Q14CW9 347 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 PIGYQ3MUY2 71 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 KRBOX4Q5JUW0 171 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 FAM27D1Q5T7N8 215 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 METAP1DQ6UB28 335 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 UNQ9370/PRO34162Q6UXP9 181 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ZNF782Q6ZMW2 699 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 CDH26Q8IXH8 852 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 PNKDQ8N490 385 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 OR51T1Q8NGJ9 327 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ZFAND2BQ8WV99 257 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 GCDHQ92947 438 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 SLC25A28Q96A46 364 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 FOXRED1Q96CU9 486 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 ZNF48Q96MX3 618 aaPredicted RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 ZNF714Q96N38 554 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 BARHL1Q9BZE3 327 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 GAL3ST2Q9H3Q3 398 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ZMAT3Q9HA38 289 aaKnown RBP6.37□□□□□ -1.39
SMG6-211ENST00000572369 PLGRKTQ9HBL7 147 aa6.37□□□□□ -1.39
SMG6-211ENST00000572369 ACOT13Q9NPJ3 140 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms