RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 HMG20AQ9NP66 347 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 SCRT2Q9NQ03 307 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TRIM36Q9NQ86 728 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TUBG2Q9NRH3 451 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 MRPL39Q9NYK5 338 aaKnown RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 PITPNC1Q9UKF7 332 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 IGHV3OR15-7A0A075B7D8 119 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 NPIPB13A6NJU9 1138 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 FAM183AA6NL82 134 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 C12orf71A8MTZ7 269 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 NPIPB4C9JG80 1138 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LRRN3E7EW58 273 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LALBAP00709 142 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 IL1AP01583 271 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 HSMCR30P0CW71 290 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 PGA4P0DJD7 388 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 PGA3P0DJD8 388 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 HIST1H1CP16403 213 aaKnown RBP5.44□□□□□ -1.54
CHD3-213ENST00000571249 OPRL1P41146 370 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 PCP4P48539 62 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 CLRN1P58418 232 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 RAP2BP61225 183 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LSM3P62310 102 aaKnown RBP5.44□□□□□ -1.54
CHD3-213ENST00000571249 ZNF846Q147U1 533 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LINC01590Q5TEZ4 76 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 OR2G6Q5TZ20 316 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LCN1P1Q5VSP4 162 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 ZNF322Q6U7Q0 402 aaPredicted RBP5.44□□□□□ -1.54
CHD3-213ENST00000571249 TMPRSS11AQ6ZMR5 421 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 ADCK1Q86TW2 530 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 LHFPL3Q86UP9 236 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 SYS1Q8N2H4 156 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 C10orf53Q8N6V4 93 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 POC5Q8NA72 575 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 BHLHE23Q8NDY6 225 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 KLHL30-AS1Q8NEE0 82 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 OR5M8Q8NGP6 311 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 MOSPD2Q8NHP6 518 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 MCFD2Q8NI22 146 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 RPS4Y2Q8TD47 263 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 UFD1Q92890 307 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 NABP1Q96AH0 204 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 ERMAPQ96PL5 475 aaPredicted RBP5.44□□□□□ -1.54
CHD3-213ENST00000571249 CCL13Q99616 98 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 NDEL1Q9GZM8 345 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 PPP1R3EQ9H7J1 279 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 ABCB10Q9NRK6 738 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 TMEM100Q9NV29 134 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 TXNL4BQ9NX01 149 aaKnown RBP5.44□□□□□ -1.54
CHD3-213ENST00000571249 BABAM2Q9NXR7 383 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 PTTG3PQ9NZH4 202 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 KAAG1Q9UBP8 84 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 SSR3Q9UNL2 185 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 TIMM10BQ9Y5J6 103 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 IER3IP1Q9Y5U9 82 aa5.44□□□□□ -1.54
CHD3-213ENST00000571249 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR6C68A6NDL8 312 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 M0R1W7 72 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 CCL24O00175 119 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OGG1O15527 345 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 NDUFB3O43676 98 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 SC5DO75845 299 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 GLCEO94923 617 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR6A2O95222 327 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 IGHG1P01857 330 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR2T7P0C7T2 308 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 RBMY1CP0DJD4 496 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 CD40LGP29965 261 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 TGFBR1P36897 503 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 AQP2P41181 271 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 CENPAP49450 140 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 TAS2R43P59537 309 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 MRPS34P82930 218 aaKnown RBP5.43□□□□□ -1.54
CHD3-213ENST00000571249 ZNF45Q02386 682 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 ZNF85Q03923 595 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 RPL18Q07020 188 aaKnown RBP5.43□□□□□ -1.54
CHD3-213ENST00000571249 ECH1Q13011 328 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 TRAM1Q15629 374 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 HIST3H3Q16695 136 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 ALG10Q5BKT4 473 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 C9orf152Q5JTZ5 239 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 LIPKQ5VXJ0 399 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 Q6ZNX1 250 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 LHFPL4Q7Z7J7 247 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 DYNAPQ8N1N2 210 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 FAM216BQ8N7L0 139 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 SLC26A10Q8NG04 563 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR2T27Q8NH04 317 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR5J2Q8NH18 312 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 OR4K13Q8NH42 304 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 FNDC8Q8TC99 324 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 HAVCR2Q8TDQ0 301 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 SPRYD4Q8WW59 207 aaPredicted RBP5.43□□□□□ -1.54
CHD3-213ENST00000571249 H1FXQ92522 213 aaKnown RBP5.43□□□□□ -1.54
CHD3-213ENST00000571249 SLC25A46Q96AG3 418 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms