RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CYB561A3Q8NBI2 242 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 OR13G1Q8NGZ3 307 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A40Q8TBP6 338 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 KLF14Q8TD94 323 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 C10orf105Q8TEF2 133 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 RDH5Q92781 318 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 RAB1CQ92928 201 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 SLCO4A1Q96BD0 722 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 HAVCR1Q96D42 359 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 CMBLQ96DG6 245 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 DUS3LQ96G46 650 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 C1orf147Q96MC9 270 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 TSSK2Q96PF2 358 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 INTS14Q96SY0 518 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 NIPSNAP1Q9BPW8 284 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 COPS4Q9BT78 406 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 MRPL37Q9BZE1 423 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 OR2J1Q9GZK6 312 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 SLC22A4Q9H015 551 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 OR51B6Q9H340 312 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TVP23BQ9NYZ1 205 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 FZR1Q9UM11 496 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 LHFPL6Q9Y693 200 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TMEM14AQ9Y6G1 99 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 DSCAMO60469 2012 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 POLQO75417 2590 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 IGHV1-69-2A0A0G2JMI3 117 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 hCG_38984A0A1B0GV85 526 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 TMEM129A0AVI4 362 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 TRIM64CA6NLI5 447 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 LRRC30A6NM36 301 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CLDN25C9JDP6 229 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ZNF878C9JN71 531 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 M0R135 149 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 DCTN6O00399 190 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PHYHO14832 338 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PPIHO43447 177 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 PRAF2O60831 178 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 GLCEO94923 617 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 LY6G6DO95868 133 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 C4BPBP20851 252 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 KITLGP21583 273 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 IGFBP5P24593 272 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PYCR1P32322 319 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 DDOSTP39656 456 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CRYBB2P43320 205 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ALDH3B1P43353 468 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 GPR6P46095 362 aaPredicted RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 SRP9P49458 86 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 ERFP50548 548 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CDC42P60953 191 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CCL8P80075 99 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PSG7Q13046 419 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 SCGB2A2Q13296 93 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 KIAA0141Q14154 515 aaPredicted RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 EIF2B1Q14232 305 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 GGTLC2Q14390 218 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 MEP1BQ16820 701 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PCK2Q16822 640 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ALKBH6Q3KRA9 238 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 SPATA46Q5T0L3 261 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CYB5R2Q6BCY4 276 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 FAM166AQ6J272 317 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 FAHD1Q6P587 224 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 FBXW12Q6X9E4 464 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 MRPL21Q7Z2W9 205 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 DCXRQ7Z4W1 244 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 LRP11Q86VZ4 500 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ERI1Q8IV48 349 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 GID4Q8IVV7 300 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 FAM219AQ8IW50 185 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ZNF101Q8IZC7 436 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ZCCHC24Q8N2G6 241 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 TEX29Q8N6K0 151 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR2Z1Q8NG97 314 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR52H1Q8NGJ2 320 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR51L1Q8NGJ5 315 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR8D4Q8NGM9 314 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR8J1Q8NGP2 316 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR9Q1Q8NGQ5 310 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR4Q3Q8NH05 313 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 SPRYD4Q8WW59 207 aaPredicted RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 TRUB1Q8WWH5 349 aaKnown RBP3.11□□□□□ -1.91
NUP88-202ENST00000570937 PYDC1Q8WXC3 89 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ASB17Q8WXJ9 295 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CCL17Q92583 94 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 TOMM40LQ969M1 308 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 C11orf52Q96A22 123 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 SLAMF6Q96DU3 332 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 ZNF799Q96GE5 643 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 NEDD4LQ96PU5 975 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 CENPOQ9BU64 300 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 MROQ9BYG7 248 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 PLA2G12AQ9BZM1 189 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 NMNAT2Q9BZQ4 307 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 GABARAPL1Q9H0R8 117 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 OR51V1Q9H2C8 321 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 TPK1Q9H3S4 243 aa3.11□□□□□ -1.91
NUP88-202ENST00000570937 RGCCQ9H4X1 137 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms