RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 TEX38Q6PEX7 206 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 LHFPL2Q6ZUX7 228 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 FAM220AQ7Z4H9 259 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 FOXRED2Q8IWF2 684 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 TRMT10AQ8TBZ6 339 aaKnown RBP8.74□□□□□ -1.01
VPS53-207ENST00000570510 HPSE2Q8WWQ2 592 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 DDB2Q92466 427 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 AQP3Q92482 292 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 SLC29A1Q99808 456 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 TMEM133Q9H2Q1 129 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 ZNF319Q9P2F9 582 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 MRM2Q9UI43 246 aaKnown RBP8.74□□□□□ -1.01
VPS53-207ENST00000570510 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 ENPP5Q9UJA9 477 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 OR52A1Q9UKL2 312 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 COPS3Q9UNS2 423 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 KLHDC2Q9Y2U9 406 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 MOB4Q9Y3A3 225 aa8.74□□□□□ -1.01
VPS53-207ENST00000570510 BAG2O95816 211 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 AMY1AP04745 511 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 AMY2AP04746 511 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 ACKR3P25106 362 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 DCKP27707 260 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 MED21Q13503 144 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 GALEQ14376 348 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 EDDM3AQ14507 147 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
VPS53-207ENST00000570510 CLVS2Q5SYC1 327 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 BCL2L15Q5TBC7 163 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 TMEM244Q5VVB8 128 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 MOB3CQ70IA8 216 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 TRAPPC6BQ86SZ2 158 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 COMMD2Q86X83 199 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 IL17DQ8TAD2 202 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 ZNF596Q8TC21 504 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 PP6455Q8WZ26 134 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 CREB3L1Q96BA8 519 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 ZNF488Q96MN9 340 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 MBOAT4Q96T53 435 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 GON7Q9BXV9 100 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 SEBOXQ9HB31 216 aaPredicted RBP8.73□□□□□ -1.01
VPS53-207ENST00000570510 NEK6Q9HC98 313 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 SLC22A13Q9Y226 551 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 POLDIP2Q9Y2S7 368 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 V9GYS6 101 aa8.73□□□□□ -1.01
VPS53-207ENST00000570510 DAPL1A0PJW8 107 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 K7N7A8 449 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 PSMD9O00233 223 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 TOR1AO14656 332 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 LDLRAD4O15165 306 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 NOS1APO75052 506 aaPredicted RBP8.72□□□□□ -1.01
VPS53-207ENST00000570510 ENTPD6O75354 484 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 GATBO75879 557 aaKnown RBP8.72□□□□□ -1.01
VPS53-207ENST00000570510 SERPINA3P01011 423 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 IGHA1P01876 353 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 TTRP02766 147 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 IFNA6P05013 189 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
VPS53-207ENST00000570510 VEGFCP49767 419 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 MEF2CQ06413 473 aaPredicted RBP8.72□□□□□ -1.01
VPS53-207ENST00000570510 HES1Q14469 280 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 KIR2DS1Q14954 304 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 CCDC58Q4VC31 144 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 OGFRL1Q5TC84 451 aaPredicted RBP8.72□□□□□ -1.01
VPS53-207ENST00000570510 PLCXD3Q63HM9 321 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 OR52W1Q6IF63 320 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 CCDC144NLQ6NUI1 221 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 SLC35E3Q7Z769 313 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 CATSPERDQ86XM0 798 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 ZNF573Q86YE8 665 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 ENTHD1Q8IYW4 607 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 BATF2Q8N1L9 274 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 ABHD12Q8N2K0 398 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 YIPF7Q8N8F6 280 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 POC1AQ8NBT0 407 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 OR10H4Q8NGA5 316 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 NRIP2Q9BQI9 281 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 GPR84Q9NQS5 396 aa8.72□□□□□ -1.01
VPS53-207ENST00000570510 NRASP01111 189 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 DBTP11182 482 aaKnown RBP8.71□□□□□ -1.02
VPS53-207ENST00000570510 MYF6P23409 242 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 HAAOP46952 286 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 POU3F4P49335 361 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 HCCSP53701 268 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.02
VPS53-207ENST00000570510 RCN1Q15293 331 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 PNLIPRP3Q17RR3 467 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 ZIK1Q3SY52 487 aaPredicted RBP8.71□□□□□ -1.02
VPS53-207ENST00000570510 ZNF691Q5VV52 312 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 UTS2BQ765I0 119 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 BCDIN3DQ7Z5W3 292 aaKnown RBP8.71□□□□□ -1.02
VPS53-207ENST00000570510 RTN4RL2Q86UN3 420 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 DRAM1Q8N682 238 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 DNAAF1Q8NEP3 725 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 OR4P4Q8NGL7 312 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 OR14K1Q8NGZ2 314 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 OR51E1Q8TCB6 317 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 ADI1Q9BV57 179 aa8.71□□□□□ -1.02
VPS53-207ENST00000570510 FGF23Q9GZV9 251 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms