RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 RNFT2Q96EX2 444 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 COQ2Q96H96 371 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 HRASLS5Q96KN8 279 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OPALINQ96PE5 141 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 RBM14Q96PK6 669 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 NR1H4Q96RI1 486 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF649Q9BS31 505 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 GABARAPL1Q9H0R8 117 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 PPIL3Q9H2H8 161 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 LINC00527Q9UJ94 153 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 AP4S1Q9Y587 144 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 TRAV39A0A0B4J263 110 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 DAPL1A0PJW8 107 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 LY6LH3BQJ8 138 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 J3QLW9 94 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 SLC33A1O00400 549 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 DEGS1O15121 323 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 KDM4BO94953 1096 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 HTR1AP08908 422 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 TMEM225BP0DP42 221 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF19P17023 458 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 ARHGDIBP52566 201 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 CDC42P60953 191 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 ISL1P61371 349 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 BNIP1Q12981 228 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 C1orf146Q5VVC0 180 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 LPCAT4Q643R3 524 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 Q6P435 159 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 UTS2BQ765I0 119 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 C16orf82Q7Z2V1 217 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 RTN4RL2Q86UN3 420 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 CCDC54Q8NEL0 328 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR4D6Q8NGJ1 314 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR56B4Q8NH76 319 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 RFESDQ8TAC1 157 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 RFKQ969G6 155 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 SPSB1Q96BD6 273 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 C10orf35Q96D05 121 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 NOL4LQ96MY1 436 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 SEBOXQ9HB31 216 aaPredicted RBP6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 TAS2R3Q9NYW6 316 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 ENOPH1Q9UHY7 261 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 HHLA2Q9UM44 414 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 OAZ3Q9UMX2 235 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.31
CTDNEP1-203ENST00000570385 A0A1W2PPE3 182 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 FUOMA2VDF0 154 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 PSMB11A5LHX3 300 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 H0YJX3 145 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 SLC16A6O15403 523 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 CLIC3O95833 236 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 SNRNP70P08621 437 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 HCKP08631 526 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 LMO1P25800 156 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 CD34P28906 385 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 CEACAM3P40198 252 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 MNDAP41218 407 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 GLP1RP43220 463 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 GNG10P50151 68 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 PRRX1P54821 245 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 HES1Q14469 280 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 CDK5R1Q15078 307 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 ZIK1Q3SY52 487 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 C8orf86Q6ZUL3 223 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 OSR2Q8N2R0 312 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 DRAM1Q8N682 238 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 OR13A1Q8NGR1 328 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 CORO2AQ92828 525 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 TOMM40LQ969M1 308 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 RPEQ96AT9 228 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 RCC1LQ96I51 464 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 KIRREL1Q96J84 757 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 C4orf36Q96KX1 117 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 MBOAT4Q96T53 435 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 OSBPL10Q9BXB5 764 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 GABARAPL3Q9BY60 117 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 COMMD4Q9H0A8 199 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 IMPAD1Q9NX62 359 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 KIF25Q9UIL4 384 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 PCDHGB5Q9Y5G0 923 aa6.83□□□□□ -1.32
CTDNEP1-203ENST00000570385 MEIKINA0A087WXM9 373 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 KBTBD11-OT1A0A1B0GTJ5 212 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 OR4C45A6NMZ5 311 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 ZNF729A6NN14 1252 aaPredicted RBP6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 NUDT19A8MXV4 375 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 ISG15P05161 165 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 FAM106CPP0CH98 169 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 CD69Q07108 199 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 TMED1Q13445 227 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 ALKBH1Q13686 389 aaKnown RBP6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 PAN3Q58A45 887 aaKnown RBP6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 CCDC144NLQ6NUI1 221 aa6.82□□□□□ -1.32
CTDNEP1-203ENST00000570385 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms