RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KIRREL1Q96J84 757 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 HOPXQ9BPY8 73 aaPredicted RBP8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 GHITMQ9H3K2 345 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 PLSCR3Q9NRY6 295 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 RBFOX1Q9NWB1 397 aaKnown RBP8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 NUFIP1Q9UHK0 495 aaKnown RBP8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 VSIG4Q9Y279 399 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 AMMECR1Q9Y4X0 333 aaPredicted RBP8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 IGHV3-72A0A0B4J1Y9 119 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 A0A1B0GTI1 187 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ODAMA1E959 279 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 PRR32B1ATL7 298 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 MPZL2O60487 215 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ENTPD6O75354 484 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 IGF1P05019 195 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ARSBP15848 533 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 HMGA2P52926 109 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 SNU13P55769 128 aaKnown RBP8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 MFGE8Q08431 387 aaPredicted RBP8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 SF3A3Q12874 501 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF146Q15072 292 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 Q6ZSR3 168 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 EME1Q96AY2 570 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 COQ2Q96H96 371 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 NABP2Q9BQ15 211 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ALX4Q9H161 411 aaPredicted RBP8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR51J1Q9H342 316 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 INTS9Q9NV88 658 aaKnown RBP8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 LAMP5Q9UJQ1 280 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF580Q9UK33 172 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
CTDNEP1-202ENST00000570380 FUOMA2VDF0 154 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 ZNF729A6NN14 1252 aaPredicted RBP8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 HSPA12AO43301 675 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 FABP3P05413 133 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 OR8U9P0C7N5 309 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 CGB3P0DN86 165 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 CGB7P0DN87 165 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 BCL3P20749 454 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 PPIFP30405 207 aaKnown RBP8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 KIR3DL2P43630 455 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 ZP1P60852 638 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 CDC42P60953 191 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 UBE2V2Q15819 145 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 DEGS2Q6QHC5 323 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 MOB3BQ86TA1 216 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 FAM58AQ8N1B3 248 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 IQCF1Q8N6M8 205 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 HAVCR2Q8TDQ0 301 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 OR4C12Q96R67 309 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 S1PR3Q99500 378 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 RASL11BQ9BPW5 248 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 MROQ9BYG7 248 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 HIPK2Q9H2X6 1198 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 IL1RAPQ9NPH3 570 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 TPSG1Q9NRR2 321 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 ING3Q9NXR8 418 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 PSG11Q9UQ72 335 aa8.02□□□□□ -1.13
CTDNEP1-202ENST00000570380 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 IGHV1-3A0A0C4DH29 117 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 TRBV2A0A0J9YWF9 115 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 KBTBD11-OT1A0A1B0GTJ5 212 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 HMGB1P1B2RPK0 211 aaPredicted RBP8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 C12orf77C9JDV5 145 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 LINC01619G3V211 115 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 G3V318 75 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 SRSF10O75494 262 aaKnown RBP8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 KRT36O76013 467 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 OR2H2O95918 312 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 IGLV1-51P01701 117 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 IGLV1-40P01703 118 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 PRKACAP17612 351 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 SOX6P35712 828 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 GNG10P50151 68 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 F2RL1P55085 397 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 ROM1Q03395 351 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 ZNF816Q0VGE8 651 aaPredicted RBP8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 KRBOX4Q5JUW0 171 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 SPIN3Q5JUX0 258 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 RNLSQ5VYX0 342 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 Q8IYB0 196 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 IZUMO1Q8IYV9 350 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 ZNF679Q8IYX0 411 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 AQP11Q8NBQ7 271 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 OR2T10Q8NGZ9 312 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 MCUR1Q96AQ8 359 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 MNTQ99583 582 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 PPIL3Q9H2H8 161 aaKnown RBP8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 CCDC134Q9H6E4 229 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 GORASP2Q9H8Y8 452 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 ACTR3BQ9P1U1 418 aa8.01□□□□□ -1.13
CTDNEP1-202ENST00000570380 IGHV4OR15-8A0A075B7B6 117 aa8□□□□□ -1.13
CTDNEP1-202ENST00000570380 A0A087WW49 117 aa8□□□□□ -1.13
CTDNEP1-202ENST00000570380 A0A1W2PPE3 182 aa8□□□□□ -1.13
CTDNEP1-202ENST00000570380 DHRS7CA6NNS2 312 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms