RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NUDCD2Q8WVJ2 157 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 DYRK2Q92630 601 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 RAB1CQ92928 201 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 CCL13Q99616 98 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 PPA2Q9H2U2 334 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 AK3Q9UIJ7 227 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 EDARQ9UNE0 448 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 KCNK7Q9Y2U2 307 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM82A0PJX8 343 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 SSX4O60224 188 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 IGHV2-70P01814 119 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 GLAP06280 429 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CD3GP09693 182 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 GPR6P46095 362 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 MRPS15P82914 257 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 HACD4Q5VWC8 232 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 OR8H2Q8N162 312 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 BPIFB2Q8N4F0 458 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 OR52I2Q8NH67 350 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 PERPQ96FX8 193 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 SDHCQ99643 169 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CCDC32Q9BV29 185 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 SCPEP1Q9HB40 452 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 MEIOCA2RUB1 952 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 GABARAPH6UMI1 98 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 PSPNO60542 156 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CA11O75493 328 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 LPLP06858 475 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 MELTFP08582 738 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 DNASE1P24855 282 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 LMO1P25800 156 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 OR3A1P47881 315 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 PDLIM4P50479 330 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM33P57088 247 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM185AQ8NFB2 350 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 SDSLQ96GA7 329 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 HDHD3Q9BSH5 251 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM165Q9HC07 324 aa12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-219ENST00000570273 A0A1B0GW55 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 SULT1C2O00338 296 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 SIGLEC5O15389 551 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ADAM20O43506 726 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ZNF737O75373 536 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 FSTL3O95633 263 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 SELLP14151 372 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 PAX1P15863 534 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 AMY2BP19961 511 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 IL13RA1P78552 427 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 GRK1Q15835 563 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ATPAF1Q5TC12 328 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 OR4S1Q8NGB4 309 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 GPX8Q8TED1 209 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 SNX22Q96L94 193 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DNTTIP1Q9H147 329 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 ING3Q9NXR8 418 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
HERPUD1-219ENST00000570273 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 NDUFA2O43678 99 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 SSX5O60225 188 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 CSF3P09919 207 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 KCNJ3P48549 501 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 DCDC5Q6ZRR9 648 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms