RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 AHSA2Q719I0 299 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 GDPD3Q7L5L3 318 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 SATL1Q86VE3 508 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 TMEM86BQ8N661 226 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 CHST4Q8NCG5 386 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 C22orf15Q8WYQ4 148 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 TMEM106AQ96A25 262 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 SLC25A28Q96A46 364 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 MND1Q9BWT6 205 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 DUSP21Q9H596 190 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 HMG20AQ9NP66 347 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 DUX4Q9UBX2 424 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 RAB26Q9ULW5 256 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 FAM96BQ9Y3D0 163 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 SIRT4Q9Y6E7 314 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-219ENST00000569136 DOCK11Q5JSL3 2073 aa7.54□□□□□ -1.2
CAPN3-219ENST00000569136 TRAV40A0A0B4J280 105 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 TRBV5-5A0A0J9YX44 114 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 hADV38S2A0JD32 116 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 F8VVB4 439 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 F8VWA3 439 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 MGST3O14880 152 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 DEGS1O15121 323 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 SPRY1O43609 319 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 ZNF780AO75290 641 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 ZNF737O75373 536 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 INMTO95050 263 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 SFTPBP07988 381 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 SELLP14151 372 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 PRKACAP17612 351 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 CELP19835 753 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 HOXA5P20719 270 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 BCL3P20749 454 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 LMO1P25800 156 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 MAPK3P27361 379 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 ERP29P30040 261 aaKnown RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 BDKRB2P30411 391 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 TGFBR2P37173 567 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 PTGFRP43088 359 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 NPBWR2P48146 333 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 SOX2P48431 317 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 GPR176Q14439 515 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 SPHARQ15513 63 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 XAF1Q6GPH4 301 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 OR8H2Q8N162 312 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 ZDHHC22Q8N966 263 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 ASCC1Q8N9N2 400 aaKnown RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 Q8NFD4 153 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 GCDHQ92947 438 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 LHX4Q969G2 390 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 GPER1Q99527 375 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 S100A13Q99584 98 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 METTL9Q9H1A3 318 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 Q9H521 79 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 RBFOX1Q9NWB1 397 aaKnown RBP7.53□□□□□ -1.2
CAPN3-219ENST00000569136 BLOC1S6Q9UL45 172 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 FOXJ3Q9UPW0 622 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 POMT1Q9Y6A1 747 aa7.53□□□□□ -1.2
CAPN3-219ENST00000569136 IGHV3OR16-10A0A075B7F0 116 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 H3BUI4 141 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RGS10O43665 173 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 ATP6V1G2O95670 118 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RBP4P02753 201 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 TFF1P04155 84 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 ZNF728P0DKX0 622 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 GABRR1P24046 479 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-219ENST00000569136 VHLP40337 213 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RANBP1P43487 201 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 ZP1P60852 638 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RPS11P62280 158 aaKnown RBP eCLIP7.52□□□□□ -1.21
CAPN3-219ENST00000569136 UBA52P62987 128 aaKnown RBP7.52□□□□□ -1.21
CAPN3-219ENST00000569136 SLC35A2P78381 396 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RSU1Q15404 277 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 SLC9A3R2Q15599 337 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 MIDNQ504T8 468 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 FBLN7Q53RD9 439 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RBM48Q5RL73 367 aaKnown RBP7.52□□□□□ -1.21
CAPN3-219ENST00000569136 C16orf87Q6PH81 154 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 IZUMO2Q6UXV1 221 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 Q6YL49 198 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 PHC2Q8IXK0 858 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 FAM185AQ8N0U4 392 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 FGFRL1Q8N441 504 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 Q8N7P7 452 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 TNFAIP8L1Q8WVP5 186 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 SSMEM1Q8WWF3 244 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 RGP1Q92546 391 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-219ENST00000569136 PHYHIPQ92561 330 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 TNFRSF14Q92956 283 aa7.52□□□□□ -1.21
CAPN3-219ENST00000569136 PGLYRP3Q96LB9 341 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms