RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 DMRTA2Q96SC8 542 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 GPR87Q9BY21 358 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 PRRG4Q9BZD6 226 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 GPR35Q9HC97 309 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 TUBG2Q9NRH3 451 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-250ENST00000568290 TREM2Q9NZC2 230 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 POLDIP2Q9Y2S7 368 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 MMP24Q9Y5R2 645 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 HS3ST3B1Q9Y662 390 aa6.62□□□□□ -1.35
ATXN3-250ENST00000568290 MSGN1A6NI15 193 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF716A6NP11 495 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF732B4DXR9 585 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 FAM90A26D6RGX4 464 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 H0Y980 276 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 TIAF1O95411 115 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MBP02144 154 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 HSPB1P04792 205 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 CFIP05156 583 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR8U8P0C7N1 319 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF883P0CG24 379 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 CEACAM1P13688 526 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF44P15621 663 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 GDF1P27539 372 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 GNRHRP30968 328 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MEOX2P50222 304 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 PPT1P50897 306 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 TAS2R30P59541 319 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 PSG4Q00888 419 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MZT1Q08AG7 82 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MST1LQ2TV78 715 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 EIF2S3LQ2VIR3 472 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 KHDC3LQ587J8 217 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ABHD17BQ5VST6 288 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF774Q6NX45 483 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 NUFIP2Q7Z417 695 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF611Q8N823 705 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZIC4Q8N9L1 334 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ZBTB34Q8NCN2 500 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR10AD1Q8NGE0 317 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR4D5Q8NGN0 318 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR13D1Q8NGV5 346 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR2G3Q8NGZ4 309 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 OR10D3Q8NH80 312 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 PSMF1Q92530 271 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MRPL24Q96A35 216 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 MSI2Q96DH6 328 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 NIPSNAP3BQ9BS92 247 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 PKIBQ9C010 78 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 TCFL5Q9UL49 500 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 LAMP3Q9UQV4 416 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
ATXN3-250ENST00000568290 AMDHD2Q9Y303 409 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 ATP23Q9Y6H3 246 aa6.61□□□□□ -1.35
ATXN3-250ENST00000568290 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 CACNA1CQ13936 2221 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 CCDC187A0A096LP49 1063 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 A0A1W2PP11 408 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 RBFOX3A6NFN3 312 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 C21orf140B9A014 251 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 GEMIN2O14893 280 aaKnown RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 SPRY1O43609 319 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 CXCL13O43927 109 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 OPN1LWP04000 364 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 CRYBA1P05813 215 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 UMODP07911 640 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 AADACP22760 399 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 S100PP25815 95 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 UCP1P25874 307 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 MAS1LP35410 378 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 GNG3P63215 75 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 SERF2P84101 59 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 EWSR1Q01844 656 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 ZNF92Q03936 586 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 MSMO1Q15800 293 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 ATP6V1FQ16864 119 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 HYAL4Q2M3T9 481 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 SNAI3Q3KNW1 292 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 ACER2Q5QJU3 275 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 SHEQ5VZ18 495 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 TMEM88Q6PEY1 159 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 RBMS3Q6XE24 437 aaKnown RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 COLCA1Q6ZS62 124 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 SLC35E3Q7Z769 313 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 FAM219AQ8IW50 185 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 H1FOOQ8IZA3 346 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 BHLHE23Q8NDY6 225 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 OR10J5Q8NHC4 309 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 CD300LFQ8TDQ1 290 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 EXTL1Q92935 676 aa6.6□□□□□ -1.35
ATXN3-250ENST00000568290 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
ATXN3-250ENST00000568290 C14orf79Q96F83 325 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms