RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 OR10R2Q8NGX6 335 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RHEBL1Q8TAI7 183 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PIGXQ8TBF5 258 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ACTL9Q8TC94 416 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PHF10Q8WUB8 498 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB2BQ8WUD1 216 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TMEM239Q8WW34 195 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 APH1BQ8WW43 257 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 FAM151AQ8WW52 585 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ASB13Q8WXK3 278 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ST8SIA1Q92185 356 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MRPS31Q92665 395 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RBPMSQ93062 196 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 HGDQ93099 445 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TIMD4Q96H15 378 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SMIM10Q96HG1 83 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SH3YL1Q96HL8 342 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 HYLS1Q96M11 299 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RNF2Q99496 336 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF426Q9BUY5 554 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ANKRD60Q9BZ19 345 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB34Q9BZG1 259 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ILKAPQ9H0C8 392 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 NLE1Q9NVX2 485 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MTCH1Q9NZJ7 389 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RWDD2AQ9UIY3 292 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TBC1D24Q9ULP9 559 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC7A11Q9UPY5 501 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MRPS33Q9Y291 106 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 HSPE1-MOB4S4R3N1 261 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RALGAPA2Q2PPJ7 1873 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 LCTP09848 1927 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 DNAH14Q0VDD8 3507 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 DOCK8Q8NF50 2099 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ACACAQ13085 2346 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 CEP295Q9C0D2 2601 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 IGHV1OR21-1A0A087WYE8 117 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TRBV6-6A0A0A6YYG2 114 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 MBLAC1A4D2B0 266 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 LRP5LA4QPB2 252 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 C9J4A7 227 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TRAPPC2LH3BP13 241 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 KLRC4-KLRK1H3BQV0 150 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GYG2O15488 501 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ARPC5O15511 151 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 CHST10O43529 356 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 FCMRO60667 390 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 SNNO75324 88 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 POP7O75817 140 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 OR2B3O76000 313 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GLSO94925 669 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TNFSF15O95150 251 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 MT-CO2P00403 227 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 PDYNP01213 254 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 C1QBP02746 253 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 IGKV3-11P04433 115 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 LGALS2P05162 132 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 KLK3P07288 261 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 NBEAP1P0C6P0 100 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF25P17030 456 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 PGAM1P18669 254 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB3BP20337 219 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 BGNP21810 368 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 PRDX3P30048 256 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 KDELR2P33947 212 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 AQP2P41181 271 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 RPS9P46781 194 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 RAP1AP62834 184 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ADARB1P78563 741 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GTF2BQ00403 316 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 OGDHQ02218 1023 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 SEMG2Q02383 582 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 SRSF6Q13247 344 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 BTN1A1Q13410 526 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ILKQ13418 452 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 AQP6Q13520 282 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GANABQ14697 944 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TAF9Q16594 264 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GUCA2BQ16661 112 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 DGUOKQ16854 277 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 MICBQ29980 383 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 PDZD11Q5EBL8 140 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GLYATQ6IB77 296 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 FAM71E1Q6IPT2 247 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 H3F3CQ6NXT2 135 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 RASSF6Q6ZTQ3 369 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TMEM179Q6ZVK1 233 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 MOB3BQ86TA1 216 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TMEM135Q86UB9 458 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF546Q86UE3 836 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 LRRC28Q86X40 367 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 MFSD6LQ8IWD5 586 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 TCTE3Q8IZS6 198 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 PUSL1Q8N0Z8 303 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 C4orf33Q8N1A6 199 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 GABRG1Q8N1C3 465 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF557Q8N988 423 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 STXBP6Q8NFX7 210 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 OR10W1Q8NGF6 305 aa2.35□□□□□ -2.03
HERPUD1-212ENST00000567944 OR9Q1Q8NGQ5 310 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms