RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SECTM1Q8WVN6 248 aa16.01■□□□□ 0.15
MSLN-207ENST00000566549 RDH5Q92781 318 aa16.01■□□□□ 0.15
MSLN-207ENST00000566549 K7EPK0 472 aa16■□□□□ 0.15
MSLN-207ENST00000566549 NUPL2O15504 423 aaKnown RBP16■□□□□ 0.15
MSLN-207ENST00000566549 DEDDO75618 318 aa16■□□□□ 0.15
MSLN-207ENST00000566549 RPL12P30050 165 aaKnown RBP16■□□□□ 0.15
MSLN-207ENST00000566549 ERVS71-1P61550 626 aa16■□□□□ 0.15
MSLN-207ENST00000566549 SPIN3Q5JUX0 258 aa16■□□□□ 0.15
MSLN-207ENST00000566549 FAM71E2Q8N5Q1 922 aa16■□□□□ 0.15
MSLN-207ENST00000566549 LHFPL5Q8TAF8 219 aa16■□□□□ 0.15
MSLN-207ENST00000566549 GLYATL2Q8WU03 294 aa16■□□□□ 0.15
MSLN-207ENST00000566549 NANOS1Q8WY41 292 aaKnown RBP16■□□□□ 0.15
MSLN-207ENST00000566549 GALNT14Q96FL9 552 aa16■□□□□ 0.15
MSLN-207ENST00000566549 TRIB1Q96RU8 372 aa16■□□□□ 0.15
MSLN-207ENST00000566549 TP53RKQ96S44 253 aa16■□□□□ 0.15
MSLN-207ENST00000566549 GALR2O43603 387 aaPredicted RBP16■□□□□ 0.15
MSLN-207ENST00000566549 IDH3GP51553 393 aaPredicted RBP16■□□□□ 0.15
MSLN-207ENST00000566549 DNAJB11Q9UBS4 358 aa16■□□□□ 0.15
MSLN-207ENST00000566549 TUBD1Q9UJT1 453 aa16■□□□□ 0.15
MSLN-207ENST00000566549 BOD1L1Q8NFC6 3051 aa16■□□□□ 0.15
MSLN-207ENST00000566549 MBPP02686 304 aaPredicted RBP15.99■□□□□ 0.15
MSLN-207ENST00000566549 NAAAQ02083 359 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 ATRAIDQ6UW56 229 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 LIAT1Q6ZQX7 453 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 SAXO1Q8IYX7 474 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 OR52M1Q8NGK5 317 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 PRRX2Q99811 253 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 SYT3Q9BQG1 590 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 DNTTIP1Q9H147 329 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 Q9N2K0 584 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 CDRT15L2A8MXV6 281 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 HERPUD1Q15011 391 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 PXDC1Q5TGL8 231 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 SUMF2Q8NBJ7 301 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 RNF141Q8WVD5 230 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 MSI2Q96DH6 328 aaKnown RBP15.99■□□□□ 0.15
MSLN-207ENST00000566549 RSRP1Q9BUV0 290 aa15.99■□□□□ 0.15
MSLN-207ENST00000566549 CNOT1A5YKK6 2376 aaKnown RBP15.99■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A10PA6NDY2 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A18PA6NE21 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A16PA6NEW6 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A20PA6NIJ5 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A8PA6NJQ4 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A7PA6NKC0 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 ZNF705EA8MWA4 302 aaPredicted RBP15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A22PA8MWA6 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A12PA8MX19 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A5PA8MXJ8 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A23PA8MXZ1 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 TSPAN4O14817 238 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 NAPSAO96009 420 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A15PP0C7V4 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A13PP0C7W8 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A14PP0C7W9 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM90A24PP0C7X0 464 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 GNRHRP30968 328 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 DEFA5Q01523 94 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 C20orf204Q6ZNR8 217 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 CNEP1R1Q8N9A8 125 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 SUCNR1Q9BXA5 334 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FBXL17Q9UF56 701 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FGF16O43320 207 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 TK1P04183 234 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 IGHV1-2P23083 117 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 GNG3P63215 75 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 TBC1D28Q2M2D7 210 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 SLC35G3Q8N808 338 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 GMPPAQ96IJ6 420 aaPredicted RBP15.98■□□□□ 0.15
MSLN-207ENST00000566549 OR2J1Q9GZK6 312 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 OPA3Q9H6K4 179 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 TAF9BQ9HBM6 251 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 FAM86C1Q9NVL1 165 aa15.98■□□□□ 0.15
MSLN-207ENST00000566549 RCC2Q9P258 522 aaKnown RBP15.98■□□□□ 0.15
MSLN-207ENST00000566549 FBXO24O75426 580 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 PMELP40967 661 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 UBE2NP61088 152 aaKnown RBP15.97■□□□□ 0.15
MSLN-207ENST00000566549 MPV17LQ2QL34 196 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 TMEM268Q5VZI3 342 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 ZNF573Q86YE8 665 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 LGI3Q8N145 548 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 C18orf12Q96KH6 178 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 ASCL3Q9NQ33 180 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 MPC1Q9Y5U8 109 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 ARHGAP21Q5T5U3 1957 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 DSPP15924 2871 aaKnown RBP15.97■□□□□ 0.15
MSLN-207ENST00000566549 IGKV1D-13A0A0B4J2D9 117 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 IGKV1-6A0A0C4DH72 117 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 HSD17B6O14756 317 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 FAM157CP0CG43 387 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 IGKV1-13P0DP09 117 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 UCP3P55916 312 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 TMEM33P57088 247 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 ZNF818PQ6ZRF7 136 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 DPPA2Q7Z7J5 298 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 FAM58AQ8N1B3 248 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 CCDC71LQ8N9Z2 235 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 ERGIC1Q969X5 290 aa15.97■□□□□ 0.15
MSLN-207ENST00000566549 BSCL2Q96G97 398 aaPredicted RBP15.97■□□□□ 0.15
MSLN-207ENST00000566549 PIGMQ9H3S5 423 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms