RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 hCG_38984A0A1B0GV85 526 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 ZNF587BE7ETH6 402 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 TERTO14746 1132 aaKnown RBP12.29□□□□□ -0.44
CDH1-209ENST00000566510 NKX2-1P43699 371 aaPredicted RBP12.29□□□□□ -0.44
CDH1-209ENST00000566510 RAB5CP51148 216 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 MLF1P58340 268 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 ZNF565Q8N9K5 539 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 OR10D3Q8NH80 312 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 BOD1Q96IK1 185 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 SCRT1Q9BWW7 348 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 MUC3AQ02505 3323 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 RAB5AP20339 215 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 RPS18P62269 152 aaKnown RBP12.29□□□□□ -0.44
CDH1-209ENST00000566510 TMEM42Q69YG0 159 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 TBC1D26Q86UD7 250 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 ABHD3Q8WU67 409 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 HPSE2Q8WWQ2 592 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 ABHD14AQ9BUJ0 271 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 PAPOLGQ9BWT3 736 aaKnown RBP12.29□□□□□ -0.44
CDH1-209ENST00000566510 EGLN1Q9GZT9 426 aa12.29□□□□□ -0.44
CDH1-209ENST00000566510 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 ZNF716A6NP11 495 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 CST7O76096 145 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 CCL2P13500 99 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 GNRHRP30968 328 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 OTX2P32243 289 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 FOLR3P41439 243 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 VAMP2P63027 116 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 OR4D5Q8NGN0 318 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 OR1J1Q8NGS3 322 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 EXTL1Q92935 676 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 EDN3P14138 238 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 SPINK2P20155 84 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 PAX6P26367 422 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 B3GALT5-AS1P59052 145 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 RNF212Q495C1 297 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 CXorf66Q5JRM2 361 aaPredicted RBP12.28□□□□□ -0.44
CDH1-209ENST00000566510 GGNQ86UU5 652 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 OR2Y1Q8NGV0 311 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 ZNF845Q96IR2 970 aaPredicted RBP12.28□□□□□ -0.44
CDH1-209ENST00000566510 TRIOBPQ9H2D6 2365 aa12.28□□□□□ -0.44
CDH1-209ENST00000566510 IGSF23A1L1A6 192 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 LINC01387J3KSC0 135 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 HSD17B6O14756 317 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 ADAM20O43506 726 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 TNFSF12O43508 249 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 TK1P04183 234 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 NQO2P16083 231 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 ATP6V0CP27449 155 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 SRD5A2P31213 254 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 UCP3P55916 312 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 PCBD1P61457 104 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 CCL20P78556 96 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 SLC23A3Q6PIS1 610 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 GPR35Q9HC97 309 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 SH2D2AQ9NP31 389 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.44
CDH1-209ENST00000566510 A0A096LPE4 126 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 TRDCB7Z8K6 153 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 SCTP09683 121 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 BCL3P20749 454 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 HAAOP46952 286 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 GPM6AP51674 278 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 SRYQ05066 204 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 ZNF266Q14584 549 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 HAGHQ16775 308 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 ZNF818PQ6ZRF7 136 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 OR5C1Q8NGR4 320 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 NIT2Q9NQR4 276 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
CDH1-209ENST00000566510 TXNL1O43396 289 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 CYC1P08574 325 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 AGAP20933 346 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 GDF1P27539 372 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 UCP2P55851 309 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 GAPTQ8N292 157 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 CPEB3Q8NE35 698 aaKnown RBP12.26□□□□□ -0.45
CDH1-209ENST00000566510 KCNE4Q8WWG9 221 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 FAM86C1Q9NVL1 165 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 DNAJC13O75165 2243 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 ZNF724A8MTY0 619 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 UBE2CO00762 179 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 S100A12P80511 92 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 OR56B2PQ8NGI1 322 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 OR2V1Q8NHB1 315 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 SGCZQ96LD1 299 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 IL36RNQ9UBH0 155 aa12.26□□□□□ -0.45
CDH1-209ENST00000566510 K7N7A8 449 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 OR2C1O95371 312 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms