RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	HABP2	Q14520	560 aa	Predicted RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ICAM4	Q14773	271 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF146	Q15072	292 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	SNCB	Q16143	134 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	SMIM21	Q3B7S5	101 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OR2G6	Q5TZ20	316 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF691	Q5VV52	312 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	LPCAT4	Q643R3	524 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OLFML2A	Q68BL7	652 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF626	Q68DY1	528 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376		Q6P435	159 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	C1orf122	Q6ZSJ8	110 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	SLC25A26	Q70HW3	274 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	UTS2B	Q765I0	119 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	LHFPL3	Q86UP9	236 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	LYPD6	Q86Y78	171 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF573	Q86YE8	665 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OR8H2	Q8N162	312 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	PRR18	Q8N4B5	295 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF561	Q8N587	486 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OR5D18	Q8NGL1	313 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OR13C9	Q8NGT0	318 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CNIH3	Q8TBE1	160 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	SSMEM1	Q8WWF3	244 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	TRUB1	Q8WWH5	349 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	DYRK2	Q92630	601 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ITFG2	Q969R8	447 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	FGGY	Q96C11	551 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	RBMXL1	Q96E39	390 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	PGLYRP3	Q96LB9	341 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CEP19	Q96LK0	163 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CHST6	Q9GZX3	395 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	PPIL3	Q9H2H8	161 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	METTL8	Q9H825	291 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	FGF20	Q9NP95	211 aa	Predicted RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	RASL12	Q9NYN1	266 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM30A	Q9NZY2	134 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	OR14J1	Q9UGF5	321 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CLEC2D	Q9UHP7	191 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	TNC	P24821	2201 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	LOC100130705	A0A1B0GUX0	176 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376		A0A1W2PP11	408 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376		A0A1W2PQ09	198 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	MEIOC	A2RUB1	952 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	CLPSL1	A2RUU4	121 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ANKRD65	E5RJM6	399 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376		H3BUX3	64 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	GABRP	O00591	440 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	KDM4B	O94953	1096 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	NXPH2	O95156	264 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	HAND1	O96004	215 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	MT-ND2	P03891	347 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	FBP1	P09467	338 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	CGB3	P0DN86	165 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	CGB7	P0DN87	165 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ATF1	P18846	271 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	COX7A1	P24310	79 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	SNU13	P55769	128 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	RPL31	P62899	125 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	TMEM95	Q3KNT9	176 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ZFP1	Q6P2D0	407 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	RBMS3	Q6XE24	437 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	RTN4RL2	Q86UN3	420 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	SYS1	Q8N2H4	156 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	PARP16	Q8N5Y8	322 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ACBD7	Q8N6N7	88 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	DNAAF1	Q8NEP3	725 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	OR4P4	Q8NGL7	312 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF671	Q8TAW3	534 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	SGCD	Q92629	289 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	EMG1	Q92979	244 aa	Known RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	MED30	Q96HR3	178 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	C8orf49	Q96NF6	230 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	OPALIN	Q96PE5	141 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	COMMD4	Q9H0A8	199 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM234A	Q9H0X4	552 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	C16orf95	Q9H693	158 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF702P	Q9H963	129 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	SEBOX	Q9HB31	216 aa	Predicted RBP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	HMG20A	Q9NP66	347 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	SERTAD4	Q9NUC0	356 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	ENOPH1	Q9UHY7	261 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	GMPPB	Q9Y5P6	360 aa		5.19	□□□□□ -1.58
TCF4-233	ENST00000566376	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	DAPL1	A0PJW8	107 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM172BP	A6NC97	362 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376		A6NDX4	124 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	VGLL3	A8MV65	326 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376		J3QLW9	94 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	SLC33A1	O00400	549 aa	Predicted RBP	5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	OR2H2	O95918	312 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	IGLV1-47	P01700	117 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	AMY1A	P04745	511 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	HTR1A	P08908	422 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	IGHV1-8	P0DP01	117 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF19	P17023	458 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	LMO1	P25800	156 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms