RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 OR6C1Q96RD1 312 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 C20orf24Q9BUV8 137 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 TINAGQ9UJW2 476 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 DKKL1Q9UK85 242 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 RALGAPA1Q6GYQ0 2036 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 TRAV1-1A0A0B4J248 108 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 GALR2O43603 387 aaPredicted RBP18.68■□□□□ 0.58
SPSB3-208ENST00000566339 ANGPTL7O43827 346 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 OR13C7P0DN81 318 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 LIFP15018 202 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 KLK2P20151 261 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 AADACP22760 399 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 ZIC4Q8N9L1 334 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 NOSIPQ9Y314 301 aaKnown RBP18.68■□□□□ 0.58
SPSB3-208ENST00000566339 DNAH14Q0VDD8 3507 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 ABCA7Q8IZY2 2146 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 SPRY1O43609 319 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-208ENST00000566339 DBHP09172 617 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 CTXN2P0C2S0 81 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 DAOP14920 347 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 RBM11P57052 281 aaKnown RBP18.67■□□□□ 0.58
SPSB3-208ENST00000566339 FOXL2P58012 376 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 PCBD1P61457 104 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 VAMP2P63027 116 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 TLE4Q04727 773 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 KIAA0141Q14154 515 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-208ENST00000566339 KHDC3LQ587J8 217 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 TMEM252Q8N6L7 170 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 ST3GAL6Q9Y274 331 aa18.67■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF729A6NN14 1252 aaPredicted RBP18.66■□□□□ 0.58
SPSB3-208ENST00000566339 H3BQ15 152 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 GEMIN2O14893 280 aaKnown RBP18.66■□□□□ 0.58
SPSB3-208ENST00000566339 TXNL1O43396 289 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 C1QL1O75973 258 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 CLDN15P56746 228 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 ACSF3Q4G176 576 aaPredicted RBP18.66■□□□□ 0.58
SPSB3-208ENST00000566339 MRPL14Q6P1L8 145 aaKnown RBP18.66■□□□□ 0.58
SPSB3-208ENST00000566339 CLEC9AQ6UXN8 241 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 SAXO1Q8IYX7 474 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 TVP23CQ96ET8 276 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 TP53RKQ96S44 253 aa18.66■□□□□ 0.58
SPSB3-208ENST00000566339 PUS1Q9Y606 427 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPSB3-208ENST00000566339 ELOA3CA0A087WX78 387 aaPredicted RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 hCG_38984A0A1B0GV85 526 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 RPL36A-HNRNPH2H7BZ11 118 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 HSD17B6O14756 317 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 NUBP1P53384 320 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 IL24Q13007 206 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF695Q8IW36 515 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 MR1Q95460 341 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 TMEM38BQ9NVV0 291 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 PARPBPQ9NWS1 579 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 TREM2Q9NZC2 230 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 MRPS17Q9Y2R5 130 aaKnown RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ARID1BQ8NFD5 2236 aaPredicted RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 PIEZO1Q92508 2521 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 TRAV20A0A0B4J274 112 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 IGKV1-12A0A0C4DH73 117 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF816-ZNF321PA0A0X1KG74 233 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 IGSF23A1L1A6 192 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 FAM24AA6NFZ4 105 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 SEC14L6B5MCN3 397 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 DFFBO76075 338 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 IGKV1D-12P01611 117 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 WNT2P09544 360 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 SLC25A6P12236 298 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 OR2B8PP59922 312 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 ID3Q02535 119 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 TSPO2Q5TGU0 170 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 GGACTQ9BVM4 153 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 TMEM242Q9NWH2 141 aa18.65■□□□□ 0.58
SPSB3-208ENST00000566339 UBE2J1Q9Y385 318 aaPredicted RBP18.65■□□□□ 0.58
SPSB3-208ENST00000566339 NKX2-6A6NCS4 301 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 SCAF4O95104 1147 aaKnown RBP18.64■□□□□ 0.57
SPSB3-208ENST00000566339 TIAF1O95411 115 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 LCATP04180 440 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 VDAC1P21796 283 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 UCP1P25874 307 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 S100A2P29034 98 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 RAC3P60763 192 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 UBE2KP61086 200 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 PNRC1Q12796 327 aaPredicted RBP18.64■□□□□ 0.57
SPSB3-208ENST00000566339 PCOLCEQ15113 449 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 DMRTC1Q5HYR2 192 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 RIPPLY2Q5TAB7 128 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 SELENOHQ8IZQ5 122 aaKnown RBP18.64■□□□□ 0.57
SPSB3-208ENST00000566339 ZNF610Q8N9Z0 462 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 SPSB4Q96A44 273 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 RAB39BQ96DA2 213 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 DUSP23Q9BVJ7 150 aa18.64■□□□□ 0.57
SPSB3-208ENST00000566339 ZNF724A8MTY0 619 aa18.63■□□□□ 0.57
SPSB3-208ENST00000566339 BCAT2O15382 392 aaPredicted RBP18.63■□□□□ 0.57
SPSB3-208ENST00000566339 ZIC3O60481 467 aa18.63■□□□□ 0.57
SPSB3-208ENST00000566339 TAGLN2P37802 199 aaKnown RBP18.63■□□□□ 0.57
SPSB3-208ENST00000566339 RPS10P46783 165 aaKnown RBP18.63■□□□□ 0.57
SPSB3-208ENST00000566339 TGIF1Q15583 401 aa18.63■□□□□ 0.57
SPSB3-208ENST00000566339 NRN1LQ496H8 165 aa18.63■□□□□ 0.57
SPSB3-208ENST00000566339 ACER2Q5QJU3 275 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms