RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 A8MXE2 369 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 ZBTB25P24278 435 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 CHRNB4P30926 498 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 OR3A3P47888 321 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 ERVK11-1P61568 191 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 TLE4Q04727 773 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 MZT1Q08AG7 82 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 PIGYQ3MUY2 71 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 DMRTC1Q5HYR2 192 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 RTN4RL2Q86UN3 420 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 OR8G5Q8NG78 346 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 KLF14Q8TD94 323 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-210ENST00000566290 DACT3Q96B18 629 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-210ENST00000566290 C14orf79Q96F83 325 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 DMRTB1Q96MA1 342 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 SULT4A1Q9BR01 284 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 GON7Q9BXV9 100 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 BEX2Q9BXY8 128 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 GSX1Q9H4S2 264 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-210ENST00000566290 TREM2Q9NZC2 230 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 JKAMPQ9P055 326 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 ZNF69Q9UC07 566 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 AK3Q9UIJ7 227 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 PURGQ9UJV8 347 aaKnown RBP14.28□□□□□ -0.12
RAB40C-210ENST00000566290 VSIG4Q9Y279 399 aa14.28□□□□□ -0.12
RAB40C-210ENST00000566290 FABP7O15540 132 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 NAPSAO96009 420 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 GSTT2P0CG29 244 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 BCL3P20749 454 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 CALCRP30988 508 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 NAAAQ02083 359 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 PSG7Q13046 419 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 CHRFAM7AQ494W8 412 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 SCGB2B2Q4G0G5 96 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 LYG2Q86SG7 212 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 MUC20Q8N307 709 aaPredicted RBP14.27□□□□□ -0.13
RAB40C-210ENST00000566290 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 ADAT1Q9BUB4 502 aaKnown RBP14.27□□□□□ -0.13
RAB40C-210ENST00000566290 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.13
RAB40C-210ENST00000566290 MGAT4CQ9UBM8 478 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF222Q9UK12 451 aa14.27□□□□□ -0.13
RAB40C-210ENST00000566290 DUS4LO95620 317 aaKnown RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 PTBP3O95758 552 aaKnown RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 PLATP00750 562 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 CA6P23280 308 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 NPBWR2P48146 333 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 SEC61A1P61619 476 aaKnown RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 DHRS2Q13268 280 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 NKPD1Q17RQ9 610 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 C4orf46Q504U0 113 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 TMEM128Q5BJH2 165 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 NKAPLQ5M9Q1 402 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 AADACL3Q5VUY0 350 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF660Q6AZW8 331 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 HAGHLQ6PII5 290 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 C12orf45Q8N5I9 185 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-210ENST00000566290 SLA2Q9H6Q3 261 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF286AQ9HBT8 521 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 NECAP2Q9NVZ3 263 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 PIPOXQ9P0Z9 390 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 SPEF1Q9Y4P9 236 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 RTTNQ86VV8 2226 aa14.26□□□□□ -0.13
RAB40C-210ENST00000566290 G3V3Q6 166 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 LILRA1O75019 489 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 DIRAS3O95661 229 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 PMP2P02689 132 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 PGA5P0DJD9 388 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 PPP3CBP16298 524 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 MDH2P40926 338 aaKnown RBP14.25□□□□□ -0.13
RAB40C-210ENST00000566290 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
RAB40C-210ENST00000566290 RBM39Q14498 530 aaKnown RBP14.25□□□□□ -0.13
RAB40C-210ENST00000566290 DHRS11Q6UWP2 260 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 NLRC3Q7RTR2 1065 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 RELL2Q8NC24 303 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-210ENST00000566290 OR13G1Q8NGZ3 307 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 SLAMF9Q96A28 289 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 MUCL1Q96DR8 90 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 NRIP2Q9BQI9 281 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 FAAP24Q9BTP7 215 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 BEX1Q9HBH7 125 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 HES4Q9HCC6 221 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF701Q9NV72 531 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-210ENST00000566290 EHFQ9NZC4 300 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 OPN4Q9UHM6 478 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 HCFC1P51610 2035 aa14.25□□□□□ -0.13
RAB40C-210ENST00000566290 A0A1W2PR80 420 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 H7C1Q1 480 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 SYNGR1O43759 233 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 OR7C1O76099 320 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF250P15622 560 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 NKX2-5P52952 324 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-210ENST00000566290 UCP3P55916 312 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 TSPAN5P62079 268 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 NKX6-1P78426 367 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF146Q15072 292 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 TSC22D1Q15714 1073 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 GAPTQ8N292 157 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms