RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 S100A13Q99584 98 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 CHST6Q9GZX3 395 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 METTL8Q9H825 291 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 ZMAT3Q9HA38 289 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 NDUFB11Q9NX14 153 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 A0A0G2JK05 382 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PP11 408 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 CCRL2O00421 344 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 DEGS1O15121 323 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 CSTBP04080 98 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 CD37P11049 281 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 SERPINA2P20848 420 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 EDDM3BP56851 147 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 GRK1Q15835 563 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 PIGYQ3MUY2 71 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 NHLRC3Q5JS37 347 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 GLIPR1L1Q6UWM5 242 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 GDPD3Q7L5L3 318 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 CHST4Q8NCG5 386 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 PPP1R35Q8TAP8 253 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 TNFRSF14Q92956 283 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
HERPUD1-210ENST00000565966 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PR64 198 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 CLDN34H7C241 214 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 MGST3O14880 152 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF780AO75290 641 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 ARL6IP5O75915 188 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 UBE2E1P51965 193 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 GPR176Q14439 515 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 EDDM3AQ14507 147 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF273Q14593 569 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 GLT8D1Q68CQ7 371 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 Q6YL49 198 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 TPRX1Q8N7U7 411 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 GFI1Q99684 422 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 PCDHB16Q9NRJ7 776 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
HERPUD1-210ENST00000565966 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 TRDV1A0A1B0GX56 115 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 RNASE1P07998 156 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 GTF2F2P13984 249 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 CCL3L1P16619 93 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 CALRP27797 417 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 DLX1P56177 255 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 ACTG1P63261 375 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 MEF2CQ06413 473 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 KLRD1Q13241 179 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 MEX3AA1L020 520 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 NPFFO15130 113 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 CSN2P05814 226 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 GALP22466 123 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 DLX6P56179 175 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 P2RX3P56373 397 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 NEDD8Q15843 81 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 PAN3Q58A45 887 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 COQ2Q96H96 371 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 BANF2Q9H503 90 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF696Q9H7X3 374 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 IFT22Q9H7X7 185 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms