RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 CSN2P05814 226 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 LMO1P25800 156 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 ARHGDIBP52566 201 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
CDH11-210ENST00000564770 C9orf152Q5JTZ5 239 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 Q6P435 159 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
CDH11-210ENST00000564770 SPSB1Q96BD6 273 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 GABARAPL3Q9BY60 117 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
CDH11-210ENST00000564770 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
CDH11-210ENST00000564770 SH2D1BO14796 132 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 DUS4LO95620 317 aaKnown RBP12.6□□□□□ -0.39
CDH11-210ENST00000564770 ISG15P05161 165 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 ZNF44P15621 663 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 ZNF20P17024 532 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 PRKACBP22694 351 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 OR3A4PP47883 348 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 KRBOX4Q5JUW0 171 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 TMEM244Q5VVB8 128 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 AMIGO2Q86SJ2 522 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 ZNF329Q86UD4 541 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 ZDHHC13Q8IUH4 622 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 OR8J1Q8NGP2 316 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 OR13C9Q8NGT0 318 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 OR56B4Q8NH76 319 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 KIRREL1Q96J84 757 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 GLS2Q9UI32 602 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 MOB4Q9Y3A3 225 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
CDH11-210ENST00000564770 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
CDH11-210ENST00000564770 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 A0A1W2PPI3 338 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 H3BUI4 141 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 J3QRE1 110 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 TOR1AO14656 332 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 VSIG8P0DPA2 414 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 ATP6V1E1P36543 226 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 CEACAM3P40198 252 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 RPL23AP62750 156 aaKnown RBP12.59□□□□□ -0.39
CDH11-210ENST00000564770 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 CDK5R1Q15078 307 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 NOL4LQ96MY1 436 aaPredicted RBP12.59□□□□□ -0.39
CDH11-210ENST00000564770 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDH11-210ENST00000564770 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
CDH11-210ENST00000564770 FAM90A18PA6NE21 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A16PA6NEW6 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A20PA6NIJ5 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 ZNF729A6NN14 1252 aaPredicted RBP12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A9PA6NNJ1 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A12PA8MX19 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A5PA8MXJ8 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 HSPB6O14558 160 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 CLIC3O95833 236 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 SNRNP70P08621 437 aaKnown RBP12.58□□□□□ -0.4
CDH11-210ENST00000564770 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A15PP0C7V4 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A13PP0C7W8 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A14PP0C7W9 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FAM90A24PP0C7X0 464 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 NFYBP25208 207 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FASP25445 335 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 THBS3P49746 956 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 ZP1P60852 638 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 SCN1BQ07699 218 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 TMED1Q13445 227 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 KPNB1Q14974 876 aaKnown RBP12.58□□□□□ -0.4
CDH11-210ENST00000564770 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 C8orf86Q6ZUL3 223 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 TOMM40LQ969M1 308 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 CREB3L1Q96BA8 519 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 B9D2Q9BPU9 175 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 OAZ3Q9UMX2 235 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 PCDHGB5Q9Y5G0 923 aa12.58□□□□□ -0.4
CDH11-210ENST00000564770 STAB2Q8WWQ8 2551 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 SACSQ9NZJ4 4579 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 OR4C45A6NMZ5 311 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 M0QZK8 103 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 MT-ND2P03891 347 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 CGB3P0DN86 165 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 CGB7P0DN87 165 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 MNDAP41218 407 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 GLP1RP43220 463 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 CD69Q07108 199 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 OR2W3Q7Z3T1 314 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 C5orf56Q8N8D9 126 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 CHST4Q8NCG5 386 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 OR51T1Q8NGJ9 327 aa12.57□□□□□ -0.4
CDH11-210ENST00000564770 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms