RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 IGKV1-12A0A0C4DH73 117 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 A0A1B0GX30 115 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 SIRPB1O00241 398 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 EI24O14681 340 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 IGKV1D-12P01611 117 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 IGLV1-47P01700 117 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 TMEM225BP0DP42 221 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 CD28P10747 220 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 GABRB1P18505 474 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 CDK2P24941 298 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 MTNR1BP49286 362 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 BLCAPP62952 87 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 KISS1Q15726 138 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 NSUN5P1Q3KNT7 163 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 ZIK1Q3SY52 487 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 KLHL22Q53GT1 634 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 ARSJQ5FYB0 599 aaPredicted RBP9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 ELP2Q6IA86 826 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 Q6P435 159 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 C1QL4Q86Z23 238 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 CBR4Q8N4T8 237 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 PXT1Q8NFP0 134 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 OR5AK2Q8NH90 309 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 ALG8Q9BVK2 526 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 MYRFQ9Y2G1 1151 aa9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 RPL36Q9Y3U8 105 aaKnown RBP9.78□□□□□ -0.84
GTF3C1-204ENST00000564664 PRKDCP78527 4128 aaKnown RBP9.77□□□□□ -0.84
GTF3C1-204ENST00000564664 ODAMA1E959 279 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 MEX3AA1L020 520 aaKnown RBP9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 G3V4G9 280 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 H3BNX3 289 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 M0QZK8 103 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 SLC33A1O00400 549 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 TOR1AO14656 332 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 MAGEB3O15480 346 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 SULT1B1O43704 296 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 MMP23AO75900 390 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF44P15621 663 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 PTGFRP43088 359 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 GLIPR1P48060 266 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 KCNJ3P48549 501 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 GBX2P52951 348 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 CD83Q01151 205 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 PAX5Q02548 391 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 AESQ08117 197 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 HABP2Q14520 560 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 KRBOX4Q5JUW0 171 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 SLC16A12Q6ZSM3 486 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 LHFPL3Q86UP9 236 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 THNSL2Q86YJ6 484 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 OR13C9Q8NGT0 318 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 BARHL1Q9BZE3 327 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 LINC00574Q9H8X3 128 aa9.77□□□□□ -0.85
GTF3C1-204ENST00000564664 KBTBD11-OT1A0A1B0GTJ5 212 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 OR2F2O95006 317 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ZFPL1O95159 310 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 HCKP08631 526 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM106CPP0CH98 169 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 CALCBP10092 127 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 RAB3AP20336 220 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 C21orf33P30042 268 aaPredicted RBP9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 MNDAP41218 407 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 SNU13P55769 128 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ZP1P60852 638 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 SCN1BQ07699 218 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 CCDC58Q4VC31 144 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF691Q5VV52 312 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 LPCAT4Q643R3 524 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 CENPVQ7Z7K6 275 aaPredicted RBP9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 Q8NFD4 153 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 OR5AU1Q8NGC0 362 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 OR10A7Q8NGE5 316 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 OR51T1Q8NGJ9 327 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 RFT1Q96AA3 541 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 R3HDM4Q96D70 268 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 RBM14Q96PK6 669 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 SPACA5Q96QH8 159 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF649Q9BS31 505 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 JAM3Q9BX67 310 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 ERVK13-1Q9NX77 482 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 DHDHQ9UQ10 334 aa9.76□□□□□ -0.85
GTF3C1-204ENST00000564664 LOC100130705A0A1B0GUX0 176 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 LY6LH3BQJ8 138 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 CGB3P0DN86 165 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 CGB7P0DN87 165 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 CDK5R1Q15078 307 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 HLA-DRB5Q30154 266 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms