RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 WIPF2Q8TF74 440 aaPredicted RBP12.06□□□□□ -0.48
SPG7-210ENST00000564409 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
SPG7-210ENST00000564409 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
SPG7-210ENST00000564409 MRPS18AQ9NVS2 196 aaKnown RBP12.06□□□□□ -0.48
SPG7-210ENST00000564409 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
SPG7-210ENST00000564409 MYRFQ9Y2G1 1151 aa12.06□□□□□ -0.48
SPG7-210ENST00000564409 RPL36Q9Y3U8 105 aaKnown RBP12.06□□□□□ -0.48
SPG7-210ENST00000564409 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 A0A087X0M5 115 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 A0A1B0GX30 115 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 ODAMA1E959 279 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 ZNF729A6NN14 1252 aaPredicted RBP12.05□□□□□ -0.48
SPG7-210ENST00000564409 OOSP1A8MZH6 123 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 ZFPL1O95159 310 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 IGLV1-47P01700 117 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 HCKP08631 526 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 TMEM225BP0DP42 221 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 ZNF44P15621 663 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 PTGFRP43088 359 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
SPG7-210ENST00000564409 GBX2P52951 348 aaPredicted RBP12.05□□□□□ -0.48
SPG7-210ENST00000564409 PRRX1P54821 245 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 SNU13P55769 128 aaKnown RBP12.05□□□□□ -0.48
SPG7-210ENST00000564409 CCDC144NLQ6NUI1 221 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 C11orf44Q8N8P7 122 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 PXT1Q8NFP0 134 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 CAPSLQ8WWF8 208 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 RFT1Q96AA3 541 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 ERVK13-1Q9NX77 482 aa12.05□□□□□ -0.48
SPG7-210ENST00000564409 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
SPG7-210ENST00000564409 TOR1AO14656 332 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 DEGS1O15121 323 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 MAGEB3O15480 346 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 CALCBP10092 127 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 GLIPR1P48060 266 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 ZP1P60852 638 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 SCN1BQ07699 218 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 AESQ08117 197 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 HABP2Q14520 560 aaPredicted RBP12.04□□□□□ -0.48
SPG7-210ENST00000564409 BEAN1Q3B7T3 259 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 ZNF691Q5VV52 312 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 Q6P435 159 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 C1QL4Q86Z23 238 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 ZNF565Q8N9K5 539 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 OR5D18Q8NGL1 313 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 STMN2Q93045 179 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 JAM3Q9BX67 310 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 PCDHB16Q9NRJ7 776 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 DHDHQ9UQ10 334 aa12.04□□□□□ -0.48
SPG7-210ENST00000564409 LOC100130705A0A1B0GUX0 176 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 M0QZK8 103 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 MMP23AO75900 390 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 CD2P06729 351 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 CD28P10747 220 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 RAB3AP20336 220 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 KCNJ3P48549 501 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 BLCAPP62952 87 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 PAX5Q02548 391 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 CDK5R1Q15078 307 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 PRAMEF5Q5TYX0 476 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 LPCAT4Q643R3 524 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 TSEN15Q8WW01 171 aaKnown RBP12.03□□□□□ -0.48
SPG7-210ENST00000564409 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 ZNF649Q9BS31 505 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 BARHL1Q9BZE3 327 aa12.03□□□□□ -0.48
SPG7-210ENST00000564409 ISG20L2Q9H9L3 353 aaKnown RBP12.03□□□□□ -0.48
SPG7-210ENST00000564409 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 IRGMA1A4Y4 181 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 BUB1B-PAK6H3BSN5 160 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 OR2F2O95006 317 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 MNDAP41218 407 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 HLA-DRB5Q30154 266 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 ZNF529Q6P280 563 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 Q8NFD4 153 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 OR52I1Q8NGK6 324 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 R3HDM4Q96D70 268 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 COQ2Q96H96 371 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.49
SPG7-210ENST00000564409 OCSTAMPQ9BR26 566 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 FAM118AQ9NWS6 357 aa12.02□□□□□ -0.49
SPG7-210ENST00000564409 AMMECR1Q9Y4X0 333 aaPredicted RBP12.02□□□□□ -0.49
SPG7-210ENST00000564409 G3V4G9 280 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 LY6LH3BQJ8 138 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 DCKP27707 260 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
SPG7-210ENST00000564409 CD83Q01151 205 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 TPTE2P1Q5T6R2 138 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
SPG7-210ENST00000564409 ASCL4Q6XD76 172 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 TMPRSS11AQ6ZMR5 421 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 SLC16A12Q6ZSM3 486 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms