RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ING4Q9UNL4 249 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 SOX21Q9Y651 276 aaPredicted RBP14.17□□□□□ -0.14
USB1-209ENST00000564387 TRAV24A0A0B4J272 114 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 SIRPB1O00241 398 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 DEGS1O15121 323 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 RGS9O75916 674 aaPredicted RBP14.16□□□□□ -0.14
USB1-209ENST00000564387 HTR3BO95264 441 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 GALP22466 123 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 UBE2E1P51965 193 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 P2RX3P56373 397 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 RBM11P57052 281 aaKnown RBP14.16□□□□□ -0.14
USB1-209ENST00000564387 FABP5Q01469 135 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 GUCA2AQ02747 115 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 KRTAP24-1Q3LI83 254 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 HSD17B12Q53GQ0 312 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 NCR3LG1Q68D85 454 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 LINC00596Q86U02 117 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 OSR2Q8N2R0 312 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 PIP4P2Q8N4L2 257 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 JAGN1Q8N5M9 183 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 SIGLECL1Q8N7X8 197 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 TMEM158Q8WZ71 300 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 FCGR1BQ92637 280 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 CORO2AQ92828 525 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 MUL1Q969V5 352 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 FOXRED1Q96CU9 486 aaPredicted RBP14.16□□□□□ -0.14
USB1-209ENST00000564387 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 SIRT7Q9NRC8 400 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 GHRLQ9UBU3 117 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 ST3GAL6Q9Y274 331 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 MRPS28Q9Y2Q9 187 aaKnown RBP14.16□□□□□ -0.14
USB1-209ENST00000564387 LINC00312Q9Y6C7 94 aa14.16□□□□□ -0.14
USB1-209ENST00000564387 hADV38S2A0JD32 116 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 ARL6IP5O75915 188 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 ZNF728P0DKX0 622 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 GTF2F2P13984 249 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 ZNF44P15621 663 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 CCL3L1P16619 93 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 EDDM3BP56851 147 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 MPV17LQ2QL34 196 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 PIGYQ3MUY2 71 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 RUSC1-AS1Q66K80 236 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 GLIPR1L1Q6UWM5 242 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 COQ2Q96H96 371 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 S100A13Q99584 98 aa14.15□□□□□ -0.14
USB1-209ENST00000564387 A0A1W2PP11 408 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 hCG_1809904A0A1W2PP81 198 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 A0A1W2PPE2 198 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 A0A1W2PR64 198 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 A0A1W2PRV1 198 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 CLDN34H7C241 214 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 CSTBP04080 98 aaKnown RBP14.14□□□□□ -0.15
USB1-209ENST00000564387 KCNJ3P48549 501 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 DLX1P56177 255 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 SRSF2Q01130 221 aaKnown RBP14.14□□□□□ -0.15
USB1-209ENST00000564387 DEFB112Q30KQ8 113 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 SLC22A6Q4U2R8 563 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 GFI1Q99684 422 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 PPA2Q9H2U2 334 aa14.14□□□□□ -0.15
USB1-209ENST00000564387 UBE2J1Q9Y385 318 aaPredicted RBP14.14□□□□□ -0.15
USB1-209ENST00000564387 TRDV1A0A1B0GX56 115 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FUOMA2VDF0 154 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A10PA6NDY2 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A18PA6NE21 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A16PA6NEW6 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A20PA6NIJ5 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A8PA6NJQ4 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A7PA6NKC0 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A22PA8MWA6 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A12PA8MX19 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A5PA8MXJ8 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A23PA8MXZ1 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 CCRL2O00421 344 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 GEMIN2O14893 280 aaKnown RBP14.13□□□□□ -0.15
USB1-209ENST00000564387 SLC22A1O15245 554 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A15PP0C7V4 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A13PP0C7W8 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A14PP0C7W9 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM90A24PP0C7X0 464 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 UBBP0CG47 229 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 CGB3P0DN86 165 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 CGB7P0DN87 165 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 SERPINA2P20848 420 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 GLIPR1P48060 266 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 SCN1BQ07699 218 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 EDDM3AQ14507 147 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 GLT8D1Q68CQ7 371 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 AWAT2Q6E213 333 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 Q6YL49 198 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 TPRX1Q8N7U7 411 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 TMEM104Q8NE00 496 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 FAM216AQ8WUB2 273 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 AJUBAQ96IF1 538 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 ZNF714Q96N38 554 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 NR1H4Q96RI1 486 aaPredicted RBP14.13□□□□□ -0.15
USB1-209ENST00000564387 HEXA-AS1Q9H8Q6 139 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 ZNF581Q9P0T4 197 aa14.13□□□□□ -0.15
USB1-209ENST00000564387 RCC2Q9P258 522 aaKnown RBP14.13□□□□□ -0.15
USB1-209ENST00000564387 ODAMA1E959 279 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 NPFFO15130 113 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms