RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GRK1Q15835 563 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 BATF2Q8N1L9 274 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 MRPS26Q9BYN8 205 aaKnown RBP13.77□□□□□ -0.21
RNF40-206ENST00000564260 METTL8Q9H825 291 aaKnown RBP13.77□□□□□ -0.21
RNF40-206ENST00000564260 PLGRKTQ9HBL7 147 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 IL36RNQ9UBH0 155 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 LINC00312Q9Y6C7 94 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 SVEP1Q4LDE5 3571 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 SLC33A1O00400 549 aaPredicted RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 CA11O75493 328 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 TOX4O94842 621 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 MGMTP16455 207 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 RAB3BP20337 219 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 OR3A1P47881 315 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 CEBPDP49716 269 aaPredicted RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 P2RX3P56373 397 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 RAB11BQ15907 218 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 C22orf42Q6IC83 251 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 C1orf229Q6ZS94 237 aaPredicted RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 C9orf139Q6ZV77 190 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 BARHL1Q9BZE3 327 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 SIRPDQ9H106 197 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 RCC2Q9P258 522 aaKnown RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 NUP50Q9UKX7 468 aa13.76□□□□□ -0.21
RNF40-206ENST00000564260 UBE2J1Q9Y385 318 aaPredicted RBP13.76□□□□□ -0.21
RNF40-206ENST00000564260 NAV3Q8IVL0 2385 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 AIPO00170 330 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 OR7C1O76099 320 aaPredicted RBP13.75□□□□□ -0.21
RNF40-206ENST00000564260 AVPP01185 164 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 ARSBP15848 533 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 DUSP1P28562 367 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 SCAND1P57086 179 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 RBM39Q14498 530 aaKnown RBP13.75□□□□□ -0.21
RNF40-206ENST00000564260 PIGYQ3MUY2 71 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 OR10K1Q8NGX5 313 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 CORO2AQ92828 525 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 Q96M66 194 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 STEAP1Q9UHE8 339 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 AK6Q9Y3D8 172 aaKnown RBP13.75□□□□□ -0.21
RNF40-206ENST00000564260 ZFHX3Q15911 3703 aa13.75□□□□□ -0.21
RNF40-206ENST00000564260 SETD2Q9BYW2 2564 aaPredicted RBP13.74□□□□□ -0.21
RNF40-206ENST00000564260 A0A0A6YYJ9 748 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 TRAV24A0A0B4J272 114 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 NOTOA8MTQ0 251 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 TMEM14DPA8MWL7 114 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 SIRPB1O00241 398 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 GEMIN2O14893 280 aaKnown RBP13.74□□□□□ -0.21
RNF40-206ENST00000564260 CRTAPO75718 401 aaPredicted RBP13.74□□□□□ -0.21
RNF40-206ENST00000564260 TFF1P04155 84 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 VSIG8P0DPA2 414 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 PRTN3P24158 256 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 FPR2P25090 351 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 PAN3Q58A45 887 aaKnown RBP13.74□□□□□ -0.21
RNF40-206ENST00000564260 GPR157Q5UAW9 335 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 CROCCP3Q8IVE0 287 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 OR4S1Q8NGB4 309 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 PTX4Q96A99 478 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 YIPF6Q96EC8 236 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 GFI1Q99684 422 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 URM1Q9BTM9 101 aaKnown RBP13.74□□□□□ -0.21
RNF40-206ENST00000564260 TM2D1Q9BX74 207 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 TMEM59Q9BXS4 323 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 C19orf12Q9NSK7 152 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 TAS2R3Q9NYW6 316 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
RNF40-206ENST00000564260 DOCK11Q5JSL3 2073 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 ZNF728P0DKX0 622 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 SMIM18P0DKX4 95 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
RNF40-206ENST00000564260 GADD45AP24522 165 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
RNF40-206ENST00000564260 EDDM3BP56851 147 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 ARF6P62330 175 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 RPS27AP62979 156 aaKnown RBP13.73□□□□□ -0.21
RNF40-206ENST00000564260 QRFPP83859 136 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 USP43Q70EL4 1123 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 FAM185AQ8N0U4 392 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 FGFRL1Q8N441 504 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 ZNF714Q96N38 554 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 DPCDQ9BVM2 203 aaPredicted RBP13.73□□□□□ -0.21
RNF40-206ENST00000564260 SELENOIQ9C0D9 397 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 OR51E2Q9H255 320 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 GAL3ST2Q9H3Q3 398 aa13.73□□□□□ -0.21
RNF40-206ENST00000564260 TRGV10A0A0A0MS01 117 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 ODAMA1E959 279 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 POM121CA8CG34 1229 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 C17orf98A8MV24 154 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 AIREO43918 545 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 CALCBP10092 127 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 FUT3P21217 361 aa13.72□□□□□ -0.21
RNF40-206ENST00000564260 EPHA1P21709 976 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms